Ricinus communis (castor bean): 8284660
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Entry
8284660 CDS
T01087
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8284660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8284660
03036 Chromosome and associated proteins [BR:
rcu03036
]
8284660
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
8284660
Coactivators
SAGA/TFTC/STAGA complex
8284660
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
8284660
STAGA complex
8284660
TFTC complex
8284660
SAGA complex
8284660
SLIK complex
8284660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
8284660
NCBI-ProteinID:
XP_002521336
UniProt:
B9S5R7
LinkDB
All DBs
Position
8:complement(7129490..7136345)
Genome browser
AA seq
609 aa
AA seq
DB search
MAESAGAAAAAASSPKPIPSPNPIDPSPQPPPQQQSQTALTNPNSNALTPPQTPSTNPQQ
QQISSPSLDPQISSSPQQQQNVNVTGMSTYQISQTLQRSPSMSRLTQITQQQQQQQNQYG
NVLRQQQQQQQQGLYGQVNFSGSGSIQQNSHQNQQLSRSALLGQSGHLPMLTGAGAVAAA
AAAAQLNLLASPRQKAGLVQGTQFHPGSSPGQPLQGMQAMGMMGSLNLTSQLRPNGPLTF
AQQRLNAGQMRQQLAQQNPLTSSQVPNLSRTSSLAFMNPQLSGLTQNAQPSMMQNSLPQQ
QWLKQMTGMPGPASPSLRLQQRQSQVLLQQQLASSSQLHQNSMTLNPQQLSQLVQQQPAM
THQQLHQQQQQQQQQQQQQQQQMQQMQQQQQPQQQLQQQLPLHQQQQQQSPRMQGPTGQK
SLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGKVDPEVEELL
LEIADDFIDNVTMFACSLAKHRKSSTLESKDLLLHLEKNWHLTIPGFSTEERNLQRKPLS
SDLHKKRLDMIRALREPSHSETNNNPREMIRQGLGNPVVTNHLIRSSPSSEQLVSQSTSS
QMLQQITRF
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtgcaggtgcagcagcagcagcagcttcatctcctaaaccaatcccatct
ccaaatccaatagacccatcgccacaaccgccaccacaacaacagtcacaaacagcgtta
acaaacccaaattcaaatgctttaacaccgcctcagaccccgtcaacaaatccacaacaa
caacaaatctcttctccttctctcgaccctcaaatttcctcttctcctcaacaacaacag
aatgtgaatgtgacaggcatgtcaacttatcaaatttcgcaaacccttcaaagatctcct
tctatgtctcgtttaactcaaattacccaacaacagcaacaacagcagaatcaatatggt
aacgtattaaggcagcaacaacagcagcagcagcaagggctatatggtcaagttaatttt
agtgggtctggctcaattcagcaaaattctcatcagaatcagcaattgtcaaggtctgct
cttttaggtcaaagtgggcatcttcctatgctgaccggtgcaggtgctgtcgccgccgcc
gccgctgccgcccagttaaatttgttggcctcaccgaggcagaaagctggtttagtccaa
gggacccaattccatccagggagttctccggggcaacctttgcagggaatgcaagcaatg
ggaatgatgggatcactaaatttgacctcacaactaaggcctaatggccctctcactttt
gctcaacaacggctcaatgctggacaaatgagacagcagttagcacagcaaaatccactc
acctcatctcaggttccaaacctatcaaggacatcgtcactggcattcatgaaccctcag
ctctctgggctgactcagaatgcacagccatctatgatgcagaactctctgccacagcag
cagtggctgaagcaaatgacaggaatgcctggtcctgcctcaccttcacttcgtcttcaa
cagaggcagtcccaggtccttttgcagcagcaattggcttcatcttctcaattgcaccag
aactccatgacattaaatccacaacagctatcccagctggtacagcagcagccagcaatg
acacatcagcaattgcatcaacagcagcaacaacagcagcagcagcagcagcagcagcag
cagcagatgcagcaaatgcagcaacagcaacaaccacagcagcaattacaacaacaattg
cctttgcatcaacagcagcaacagcaatctccaaggatgcaagggccaacaggccagaaa
tctcttagtttaacaggatctcaaccggatgcaacagcatctggcacgactacaccaggg
ggaagttcaagccaaggaacagaagctactaatcaattacttgggaaaagaaagatacag
gacttggtttcacaggtggattcacagggaaaggtagatcctgaagttgaagagcttctt
ttggagattgctgatgactttattgataatgtgactatgttcgcatgcagtttggccaag
caccgaaaatcttcaactttagagtccaaagatttattgctacacttagagaagaactgg
catctgacaattcctggattttcaactgaagaacgaaatttgcaaagaaaacctttatcc
agtgacctccataagaagcgtcttgacatgatccgtgcattgagggagccctcacactcg
gaaacaaataataaccctagagagatgatcagacaagggcttggcaacccggttgtcact
aaccacctgataagatcatcgccgagttcagagcagttggtttctcaatcaaccagttct
caaatgctgcagcagatcacacgattttag
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integrated database retrieval system
