Ricinus communis (castor bean): 8285404
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Entry
8285404 CDS
T01087
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
8285404
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcu01002
]
8285404
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8285404
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8285404
Peptidases and inhibitors [BR:
rcu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8285404
Ubiquitin system [BR:
rcu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8285404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
8285404
NCBI-ProteinID:
XP_015571889
LinkDB
All DBs
Position
6:4099754..4120252
Genome browser
AA seq
1116 aa
AA seq
DB search
MTLMTPPPLDQQEDDEMLVPHTEFTEGPQPMEVAPAETASAVDAQSADDPPSARFTWTID
NFSRLNTKKLYSDVFIVGGYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSL
CVVNQIHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVEADVAVR
RVIDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
DGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIK
RALEEQYGGEEEQLPQANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEH
LRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARSEDLLEQIGKDIYFDLVDHDKVRSFRIQ
KQMPFNLFKEEVVKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNK
ANNAELKLFLEVEFGQDLRPIPPPEKTKEDILLFFKLYDPSKEELRYVGRLFVKGAGKPL
EILTKLNEMAGFASDQEIELYEEIKFEPNVMCEHIDKKLTFRASQLEDGDIVCFQKSAQD
GGGEQCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFCLELSKLHNYDDVVERVATHLGL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLAHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKIKVELSHLSAELRLLEVFYHKIYK
IFPHNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFMKDPTQNQQVQNFGEPFF
LVIHEGETLSEVKVRVQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYG
AWEQYLGLEHSDNAPKRSYSANQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactcctccaccattagatcagcaagaggacgatgaaatgttagtccct
cacactgagttcactgaaggtcctcagcctatggaagtagcacctgcagaaacagcaagt
gcagttgatgcgcagtcagctgatgatccaccatcagcaaggttcacatggacaattgat
aatttctcgaggctcaataccaagaagctctactctgatgttttcattgttggaggctat
aaatggcggattctaatttttccaaaggggaacaacgtggatcatttgtcaatgtattta
gatgtcgcagactctgcaactttgccatatgggtggagcagatatgctcaatttagttta
tgcgttgtcaatcaaattcatcaaaaatactctattcggaaagacacacagcaccaattc
aatgcacgtgagagtgattggggcttcacttcattcatgccccttggagaattgtatgac
cctggtagaggttatcttgtcaatgatacatgtgtagttgaagctgatgttgctgtccgt
agggtcattgattactggtctcatgattccaaaaaggagactggttatgttggacttaag
aaccaaggagctacctgctatatgaactctctccttcaaacactgtatcatattccttat
ttcagaaaggctgtgtatcatatgccaacaaccgagaatgatatgccatcggggagcatt
cctctggctttgcagagtttattctataagcttcaatatagtgacaccagtgtagcaaca
aaagagttaacaaaatcttttggctgggacacatatgattctttcatgcagcatgatgtg
caagaacttaatagggttctttgtgaaaagcttgaagataaaatgaagggaacagttgtg
gagggcacaatacaacagttatttgaagggcaccatatgaattatattgagtgcatcaat
gtagactataagtcaacgagaaaggaatctttttatgatcttcagcttgatgtcaaaggc
tgtcgggatgtttatgcttcttttgacaaatatgtggaggtggagcgtcttgagggtgat
aataaatatcacgctgagcaacatggcttgcaggatgctaggaagggtgtcctatttatt
gactttccccctgttcttcaacttcaattgaaacggttcgaatatgatttcatgcgggat
actatggtaaagataaatgatcgctatgagttccctttgcaacttgatcttgatagagaa
gatggtaaatatttgtctcctgaggcagacagaagtgtccgaaacctgtatactcttcac
agtgttttagttcatagtggtggtgtgcatggtgggcactactatgcttacatccggcca
accctctcagatcaatggtttaaattcgatgatgagcgggtaactaaagaggatataaaa
agggcgctagaggagcagtatggtggggaagaagagcagttaccacaggcaaatcctggc
ttcaacaactctcccttcaagtttacaaaatattcaaatgcttatatgcttgtgtatata
cgcgaaagtgacaaagaaaagataatttgtaatgtggatgagaaggacattgccgaacac
ctgaggataaggttgaagaaagaacaggaagaaaaggaacaaaagagaaaggaaaaagct
gaggcccacttgtatactatcataaaggttgctcgtagtgaggatctgcttgaacagatt
gggaaggatatatattttgatcttgtagatcatgacaaagttcgtagtttccgcattcag
aaacaaatgccctttaatcttttcaaggaagaagttgtcaaagagtttggtataccagtt
caatttcaacgtttttggttatgggcgaagcggcaaaaccatacatatcgtccaaatcga
ccattgactcctcaggaagaagcacaatctgttggacaattaagagaggtttccaataaa
gcaaataatgccgagctgaagttgtttctggaagtagaatttggacaagatttgcggcct
attcctcctcctgagaagactaaagaggatattctcctcttttttaaactttatgatccg
tcgaaagaggagctccgatatgtcgggaggctatttgtaaagggggctggaaagccatta
gagatattgacaaagctaaatgaaatggctggctttgcttctgatcaagagattgaacta
tatgaggaaataaaattcgaacctaatgtcatgtgtgaacacattgacaagaagctcacg
tttcgtgctagtcagcttgaagatggggatattgtttgctttcaaaagtccgctcaagat
ggaggtggtgaacaatgccgttacccagatgtaccttcatttcttgaatatgtacataac
cgtcaggttgttcgctttcgatctttggagaaaccaaaggaggatgaattttgtcttgag
ctatcaaagcttcacaattatgatgatgttgttgaaagagtagctacgcatcttggcttg
gatgacccttccaaaattaggcttacatctcataactgttattctcaacaacctaagcca
caacctatcaagtaccgaggggtggatcatttgtctgacatgctggctcactacaaccag
acatctgacatcctttactatgaagtgctggatatccctctgccagaactgcaaggcttg
aaaaccttgaaagttgcttttcatcatgccacaaaggatgaggtggtgattcatacaatt
agattgcctaaacagagcactgtaggtgatgttattaatgaccttaagataaaggttgag
ttgtcccatctcagtgcagaacttagattgcttgaggttttctaccacaagatttacaag
atctttccccacaatgaaaagattgagaatattaatgatcagtactggacgttacgtgct
gaggagattccagaagaggagaaaaaccttggtcctaatgatcgcttgattcatgtttat
cattttatgaaggacccaactcaaaatcagcaggttcagaattttggcgaaccatttttc
ctggtcattcatgagggtgagacattgtcggaagtaaaagtgcgagtacaaaaaaaattg
caggttcctgatgaggagtttgctaagtggaagtttgcttttctgtcacttggtcgacct
gaatatctccaagactcggacattgtatcgagtaggtttcagagaagggatgtctatggt
gcttgggagcagtatctcggactggagcactctgacaatgctcctaaaaggtcatattca
gctaatcagaatcggcacacgtttgagaagccagtaaaaatctacaattag
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