Ricinus communis (castor bean): 8288093
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Entry
8288093 CDS
T01087
Name
(RefSeq) endo-1,4-beta-xylanase 1 isoform X2
Organism
rcu
Ricinus communis (castor bean)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_10
CBM_4_9
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
8288093
NCBI-ProteinID:
XP_015575457
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Position
2:complement(4439992..4444810)
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AA seq
763 aa
AA seq
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MDRMVSSLVILSVMVLLFGSFAESVLVPNQLLQSARRSHNAVGEDNIILNPRFGDGLNNW
SSKGCKIELHESMVDGKIIPQSGKVFASATERTEKWNGIEQEITGRVLHHVAYQVTAVVR
IYSDNVTSAAVQATLWVQEQDLREEYLAIANLQVTDNDWVQLQGEFLLNASPSRAIIYLE
GPPPGTDILINSLNVKHAEKISASARPVSKDVPFGMNIVDNSNLDDGTTGWFPLGNCALS
TETGSPRVLPPMARESLGPNKPLSGRYILVTNRSDSWMGPAQMITDKLKLYLTYQVSAWV
RIGAGATGFQILNVALGMDGEWINGGEIESSDNKWHEIGGSFRIEKQPSNVMVYVQGPAS
GVDLMVAGLQIFPVNRKARFKYLKKQTEKIRKRDIILKFSGSETSNFLGNFVKVEQTQNS
FPLGSCITRTSMDNDAFVKFLVKNFNWVVFENEMKWSWTEPQEGKFNYKETDELVDWCKS
HNMEMRGHCIFWEMEYAIQSWVRSLNGIDLMTAVQNRLTDLLTRYKGKFRHYDVNNEMLH
GSFYQDRLGKDIRANMFKTAHQLDPSATLFVNDYHIEDGSDIRSTPEKYIQQILELQEQG
APVGAIGIQAHIDVPVGPIVSSALDKLGTLGLPIWFTELDVSSANEYIRAEDLEVMLREA
YAHPAVEGVILWGFWELYMSRKYAHLVNADGKINVAGKRFLALRKEWLSHANGHINEQGE
FRFRGFRGTYNIEINSSSKKVNKTIVVDQGELPLVVSIDLQDF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtatggtttcttccttggttatcctttctgttatggttttgctttttggaagt
tttgcagaatcagttcttgtgcccaatcaactgctccagagtgcaagaagaagtcataat
gctgttggagaagataacattatattgaaccctagatttggggatggccttaataattgg
tctagcaaaggctgcaagattgaactgcatgaatctatggtagacggaaaaatcattccg
caatcaggaaaagtctttgcttctgcaacagaaaggacagaaaagtggaacggaattgaa
caagagatcactggaagagtactgcaccatgttgcttatcaggtcacagcagtggttcgc
atatacagtgacaatgtcaccagtgctgctgtacaggccactttgtgggttcaagaacaa
gatcttcgtgaagagtacttggccattgccaatttgcaggttacagataatgattgggta
cagttacagggagagttccttcttaatgcttccccatcaagagcaataatatatttagaa
ggtccacctccaggaactgatatacttataaatagtttaaatgtgaagcatgcagagaaa
atctctgcatcagctcgaccagtttctaaggatgtcccttttggaatgaacatagttgat
aatagcaatcttgatgatggcaccactggatggtttcctcttggtaactgtgctttgagt
actgaaactggttcaccacgtgtattgcctccaatggcaagagaatctcttggacctaat
aagcctctaagtggccggtacattttggtaaccaatcgttcagattcttggatgggtcct
gcacaaatgataactgataaattgaaactctatttgacatatcaagtatctgcttgggtt
cgtattggcgctggagcaactggctttcagattttgaatgttgcacttggtatggatgga
gaatggataaatgggggtgaaattgagtccagtgataacaagtggcatgaaattggtggg
tcatttagaattgagaagcaaccatctaatgttatggtttatgtacaaggtcctgcttca
ggtgttgatttgatggtggcaggacttcagatttttcctgtaaatcggaaagcaaggttt
aagtatttgaagaagcaaactgagaagatacgcaagcgtgatatcatcctaaaattttca
ggatcagaaacaagcaattttcttggcaactttgttaaagttgaacagacacaaaacagt
tttcctttgggatcatgtataaccagaaccagcatggacaatgatgcatttgttaaattt
ttagttaaaaactttaactgggttgtgttcgaaaatgaaatgaagtggtcatggaccgaa
ccacaagagggtaaattcaattacaaggaaactgacgagcttgtggactggtgcaagagc
cacaacatggaaatgcgaggtcactgtatattttgggaaatggagtatgcaattcaatca
tgggttcgatccttgaatgggattgacttgatgactgctgtacagaatcgtctaacagac
cttctcactcgctacaaaggaaagttcagacactatgatgtgaacaatgagatgctgcat
ggatcattttatcaagatcgactgggtaaagatatccgagcaaacatgttcaagactgcc
caccaacttgacccatctgccaccctctttgtgaatgattaccacattgaggatggaagt
gacattagatcaacgccggagaaatacatacagcaaattcttgaactccaagagcaaggt
gctccagtgggagcaattggtattcaagcgcatatcgatgttccagttggacccattgtt
tcttctgctttggataaattaggaactcttggtcttccaatctggtttacagaacttgac
gtgtcttctgctaatgagtatattagagcggaggatttggaagtaatgctccgcgaggct
tatgcacatccggcagttgaaggtgtgattctatggggattctgggagttgtatatgtcc
cggaaatatgctcatctagtgaatgcagatggtaaaatcaatgtagcaggtaaaagattc
cttgctcttaggaaagagtggctctctcacgctaatggtcatattaatgagcaaggagag
ttcagatttagaggatttcgcgggacgtacaatattgaaattaattcctcttcaaagaaa
gttaacaagacaattgttgttgaccagggtgagttaccacttgttgtctctattgacttg
caagacttttag
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