Roseobacter denitrificans: RD1_0679
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Entry
RD1_0679 CDS
T00376
Name
(GenBank) racemase, putative
KO
K18983
D-galactarolactone cycloisomerase [EC:
5.5.1.27
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00053
Ascorbate and aldarate metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
RD1_0679
Enzymes [BR:
rde01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.27 D-galactarolactone cycloisomerase
RD1_0679
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GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
ABG30376
RoseoBase:
RD1_0679
UniProt:
Q16CB7
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Position
complement(660302..661471)
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AA seq
389 aa
AA seq
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MKITRIISHVLQYEMPEQLGYSQQYYDRRTAHLVEVETDEGITGWGECFGPGNIALANKG
IVEKVIQPMVLGMDPMDRDVIWHKVYNLMRDHGQKGMPMQSLSGVDIALWDIAGKVAGLP
LHKMIGGAHRTSVPCYGYGMMLRDEPVDALAARFTDEAAAIRDMGFVATKMKTGFGPKPD
VALCTAVRKGVGDGYPFMVDANHAYTTSDAFYVGRALDELDAYWFEEPIAPEDHAGYAEL
RRGLSVNISGGEAEFGRWGWRAILENRGLDIAQPEVCALGGISEYLRVLALCHAHFTPVV
NHVWGSAIAVAANLQLLAAMPPLPGGLHPWEPMLEFDTTDNKFRDDLLTQPLNIQAQVKA
NAGRVTIPDGPGIGVEPDRDFIAHYALAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcacccgcatcatcagccatgtattgcagtatgaaatgcccgagcagcttggg
tattcgcagcagtattatgaccggcgcacggcgcatctggtcgaggtggagacggatgag
ggtatcactggctggggcgagtgtttcgggccgggcaacatcgcgctggccaataagggc
atcgtcgaaaaggtgatccagcccatggtgctcggcatggatccgatggaccgcgacgtg
atctggcacaaggtttacaatctcatgcgcgaccacgggcaaaaggggatgccgatgcag
tccctgtccggggtggatatcgccctgtgggatattgctggcaaagtcgcaggcttgccg
ctccataaaatgatcggcggcgcacatcgcacgtcggtgccctgttacgggtacggcatg
atgctccgggatgaacccgttgacgcgctcgccgcccgtttcaccgatgaagccgccgca
atcagggacatgggtttcgtcgccaccaagatgaaaacaggtttcggccccaaaccggat
gtggccctttgcaccgccgtgcgcaaaggcgtcggcgatgggtatcctttcatggtggat
gccaatcacgcctacaccacctctgacgcattttacgtgggccgggcgttggacgaactg
gacgcctattggttcgaagagcccatcgcgcccgaggaccatgccgggtatgccgaactg
cggcgcgggctgtcggtcaatatctcgggtggggaggcagaattcggccgttggggttgg
cgcgcgatccttgaaaaccgcgggctggatatcgcccaacccgaagtttgcgcccttggt
ggcatcagcgaatacctgcgggttctcgccctgtgtcatgcgcatttcacccccgtggtg
aaccacgtttggggatccgctattgctgttgctgcgaacctgcaactgctcgccgccatg
ccccccctgcccggtggcctgcacccgtgggagccgatgctggagtttgacaccaccgac
aacaaattccgcgacgacctgctgacgcagcccctgaacattcaggcgcaggtcaaggcc
aacgcaggtcgcgtcaccattccagacggccccggtatcggggtcgaaccagatcgggac
tttatcgcccattacgctttagccgcgtaa
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