Roseobacter denitrificans: RD1_1774
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Entry
RD1_1774 CDS
T00376
Name
(GenBank) lysM domain protein
Organism
rde
Roseobacter denitrificans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
ABG31393
RoseoBase:
RD1_1774
UniProt:
Q169F0
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Position
1698685..1699971
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AA seq
428 aa
AA seq
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MKDNGSANPSQSTGLLTAGLVIAGLIAAAVFLSMRDSGRLSEEAVAVLESSGGAGGNQVV
TQQIEADDAPQEIPQDAPQDAPVAQTEPEEAAPTIDEVRVDTGGTMVIAGRAGPGAQVDV
LLDGEVVTTAQADSTGSFAAVSSVTADEGARSLTLRSGEGDEAVASVDEIILAPVTPLAD
LPPPDAAPDQPETATAPTAMVQDAGTGAEPAQDEEPAQAVQEIAAVDPPAPDQSDVAPPA
EAEAAPTAEGTEDPAIAVLRSDAQGVSRVQTAPASRIMLDTISYSDAGDVQLGGRAGTGA
VEVRAYLDNRAVARMRVEPDGQWRGVIEDVAAGIYRLRVDALGQDGAVTSRLETPFKREA
PAVLEAATQAATGQIQAITVQAGDTLWAIARERYGEGLLYVQVFEANRSEIRDPDLIYPG
QVFDLPAD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaatgggtctgccaacccatcccagagcaccggtctgttgaccgcgggcctc
gtgattgcggggctgatcgcggcggcggtatttttgtcgatgcgcgattccgggcggctg
agcgaagaggccgtggcggttctggaatcctctggcggggcggggggcaatcaggtcgtc
acgcagcagatcgaagccgatgatgcgccgcaggagataccacaggacgcgccgcaagac
gcgcccgttgcgcaaacagagcccgaggaggccgcgcccacgattgacgaggtgcgggta
gacacgggcggaacgatggtgattgccgggcgcgcagggccgggcgcgcaggtcgatgtg
ctgctcgacggtgaggtcgtcaccacagcgcaggccgattcaaccggttcattcgcggcg
gtgagttcggtaacggcggatgagggcgcacgcagcctgaccctgcgcagcggtgaaggg
gacgaagcggtcgcgtccgtggatgagattatcctcgccccggtcacgccgctggcggac
ctgccgccaccggacgcagcgccagaccagcccgagactgcgaccgcgccaacggctatg
gtgcaggatgcgggcacgggtgcggagccggcgcaggacgaagaacctgcgcaagcggtg
caggagattgcggcggtggatccccccgcgcctgatcaaagcgatgtcgcgcccccggcg
gaggcggaggccgcgcccactgccgaggggacggaagatcccgcgatcgccgtattgcgt
tcggatgcgcaaggggtgtcgcgggtgcagacggccccggcgtcgcggatcatgctcgac
acgatcagctattcggatgcgggcgacgtgcagcttggcgggcgcgcgggcaccggcgcg
gtcgaagtgcgcgcctatctcgacaaccgggcggtggcccgtatgagggtggagcccgac
gggcaatggcgcggtgtcatcgaagatgtggcagcgggtatctaccggttgcgtgtggat
gcgctggggcaggatggcgcggtgacgagccgtctggaaacaccgttcaaacgcgaggca
ccggctgtgctggaggcggccacgcaggcagccaccgggcagatacaggcaattaccgtg
caggcgggcgacacgctctgggccattgcgcgtgagcgatatggggagggcttgctttat
gtgcaggtctttgaggccaatcgcagtgaaatacgcgaccccgatctgatctatccggga
caggttttcgaccttcccgcagactaa
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