Roseobacter denitrificans: RD1_1817
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Entry
RD1_1817 CDS
T00376
Symbol
dnlI
Name
(GenBank) thermostable DNA ligase
Organism
rde
Roseobacter denitrificans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ABG31433
RoseoBase:
RD1_1817
UniProt:
Q169B0
LinkDB
All DBs
Position
complement(1741635..1743233)
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AA seq
532 aa
AA seq
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MKEFAALFNAIDQSTKTTVKTAALASYFAKAPKEDRLWTIALFSGRRPKRAVTTSKLREW
AAETADIPLWLFEESYPIVGDLAETIALVLPDTTSTNDTPLSDWITALRALSEADDAQRK
AFVRDAWATLGGTERFVFNKLITGGFRVGISQKLMTRALSKATGKPETELAHRLMGNWHP
DDTTWDALIEADDPMADASRPYPFYLSYGLEGAVEDLGSPSDWVAEWKWDGIRGQLILRD
GQYFVWSRGEELMTDRFPELAQAVDFFPAGTVLDGELLVWEAGADAPSSFNALQKRIGRK
TVPKKLLAEAPVVLHAYDVLEWQGVDIRQRPFAERRAILQDACTALPATAPVKQSPQLSF
QDWDSLAQHRGAAREAQAEGVMLKRADSPYLVGRKKGDWWKWKLDPLTIDAVMIYAQAGH
GRRANLFTDFTFAVRHGNDLVPFTKAYSGLTDAEFRAITAWVRKNTLQRFGPVRQVTPHH
VFEIAFEGIQASPRHKSGVALRFPRMARWRQDKPLQEANTLDDLKQMLELYG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaattcgcagcgcttttcaatgcgatcgaccagagcaccaagaccaccgtcaaa
acggcggcacttgcgtcctattttgccaaggccccgaaagaggaccggctgtggacaatc
gcgctcttttccggtcgcaggccaaaacgggcggtcacaacctcaaagttgcgcgaatgg
gcagcggaaacggccgacattcccttgtggctcttcgaggaaagctatccgatcgtcggc
gatctggccgaaacgatcgccttggttctacccgacaccaccagcacgaacgacacaccc
ctgtccgattggatcaccgccttgcgcgccttgtcagaggcggacgatgcgcaacgcaaa
gccttcgtgcgggacgcatgggcaaccctcggcggcacggagcgttttgtgttcaacaag
ttgatcaccggcggttttcgcgttgggatcagtcaaaagctgatgacccgcgcgttgtca
aaggccacgggcaagcccgaaaccgaactggcgcatcgcctgatgggcaactggcacccg
gatgacaccacatgggacgccctgatcgaggcggacgacccgatggcggatgcctcgcgc
ccctatccgttctacttgtcctacgggctggaaggggcggttgaagacctcggcagccca
tcagactgggttgcggaatggaaatgggacggcattcgcggccagttgatcctgcgcgac
gggcaatatttcgtgtggtcgcgcggcgaggagttgatgacggaccgctttccggaactg
gcgcaggcggttgactttttcccggcaggcaccgtgctggatggcgaattgctggtctgg
gaggcgggtgccgacgcgccgtccagtttcaatgcgctgcaaaaacggatcgggcgcaaa
acggtgcccaaaaagctgctcgcagaagcacctgtcgtgctgcacgcctatgatgtgctg
gaatggcagggcgtggatatccgccaacgcccctttgcggaacggcgcgcgatcctgcag
gacgcctgcacggccctgccggcaacggcgccggtaaaacaatccccccagctttcgttt
caagactgggacagtctcgcgcaacatcgcggtgctgcgcgcgaggcacaggccgaaggg
gtgatgctgaaacgcgccgacagcccctatctggtgggacgcaaaaagggggattggtgg
aaatggaaacttgatccactgacgattgatgccgtgatgatctatgcgcaggccgggcat
gggcggcgcgcgaatctcttcaccgatttcacctttgcggtgcgccatggcaatgacctc
gtgccattcaccaaagcctattccggcctgaccgacgccgaattccgcgccattaccgct
tgggtgcgtaaaaacacgctgcagcgttttggcccggtgcgccaagtgacgccgcaccat
gtctttgaaatcgcatttgaaggcattcaggccagcccacgccataaatccggcgtggcg
ctgcgctttccccgcatggcgcggtggcgacaggataaacccctgcaagaggccaatacg
ctggatgacctcaagcagatgcttgaattatatggctaa
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