Roseobacter denitrificans: RD1_2533
Help
Entry
RD1_2533 CDS
T00376
Symbol
acrF
Name
(GenBank) RND multidrug efflux transporter protein
KO
K18138
multidrug efflux pump
Organism
rde
Roseobacter denitrificans
Pathway
rde01501
beta-Lactam resistance
rde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RD1_2533 (acrF)
01503 Cationic antimicrobial peptide (CAMP) resistance
RD1_2533 (acrF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_2533 (acrF)
01504 Antimicrobial resistance genes [BR:
rde01504
]
RD1_2533 (acrF)
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_2533 (acrF)
Antimicrobial resistance genes [BR:
rde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RD1_2533 (acrF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ABG32091
RoseoBase:
RD1_2533
UniProt:
Q166K2
LinkDB
All DBs
Position
complement(2419917..2423048)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLSTVFIKRPKMAIVISTVLTLMGLVAYSVIPVEQFPNITPPVVNVTASYIGANAETVES
TVAAPIEAEVNGVEDMIYMSSDSSDTGSYSLSVTFDVGTDPTIATVNVQNRVSQAMSGLP
VEVTSTGVVTEKSSTSMLLVATLFSPNGTYDEVFLSNYASINLKDALARAPGVGKAEVLT
DFAYAMRIWMDPDRMTGLGVTQADVMAAIREQNLTVSAGQIGAPPAPENQQFQYTVTAQG
RLATVAEFENIIIRTGDSGSVLRMKDIARIELGASSYSVSGQYEGQPATVIAVYQAPGEN
ALSVAEGVYAELDRLSQAFPDDIAYEVPFDSTDFVEQSLNDVVSTLILTFILVMSVVFVF
LGSARATLIPAVAIPVSLIGTFAFLLLMGMTLNTISLFALVLAIGIVVDDAIIVVENVER
VIAEEGLSPPEATAKAMTQITTPVIATTLVLLAVFVPVTFMPGISGQLFSQFAVTISVAV
VISSINALTLSPALCAIVLKKRSGPPRGLLASFEKVIGGLRDGYAGIVGRLVRLPILGLA
ILIALGLGSGSMMGSLPKGFLPLEDNGYVFVDIQLPDASTLQRTEVVSDRLNTQIRALGG
VANTVQVNGFSLLNGVGSNGAMIIVNLDNWEERQDPSLSADGILAQIFGIAAQEASAKVL
AFNPPPISGLGVSAGVEMKVQQTGGGAANDLSAAVNSLVFAANQRPEIAQAYTSFSANVP
KLFVDLDREKTRTLGIPVSDVFETLQAHLGSIYVNDLNLFGKVYRVMIQADASFRDTVED
IGRLHVRTQDGEMAPLSTLIDVEKVLGPVLLNRYNLFRAATVTAVPAAGYSTGDAIAVLQ
EEALTALPPGYAYEWTGTAQQQLDAGGTVILVLAAAIIFGYLFLVAQYESWTMPLGILLS
VTVALFGALAAVLVTAGDVNLYTQIGMIMLIGLASKNAILIVEFAMEERANGASIREAAL
QAARQRFRAVMMTALSFLLGVVPLLVASGAGAASQKAIGIAVFGGMLAATVIGVIVVPVL
YVLLQSVREKVKGMLKHKDVTAN
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaacagttttcatcaagcgccccaagatggccattgtgatttcaacggtcctc
acgctcatgggtctggttgcctactcggtgatcccggtcgaacagtttccaaacattacc
ccgcccgtggtcaatgtgaccgccagctatatcggtgcaaatgccgaaacggtggaaagc
accgtcgccgccccgatcgaggcggaggtcaacggcgtggaggatatgatctacatgtcc
tctgacagcagcgacacaggcagctattccctgtcggtcaccttcgatgtgggcaccgac
cccacgatcgcaacggtcaatgtgcaaaaccgcgtatcacaagcgatgtcaggcctgccg
gtcgaagtcacatcaaccggcgtcgttacggaaaaatcgtcaaccagcatgcttttggtc
gccacgctgttctcgcccaatggcacgtatgacgaggtgtttttgtcaaattacgcctcc
atcaacctcaaggatgcgctcgcccgggcgccgggcgtgggcaaagcggaggttctgacc
gactttgcctatgccatgcgcatctggatggacccggaccggatgaccggcctcggtgtc
acgcaggccgatgtcatggcggccattcgcgagcagaacctgaccgtatcggccgggcag
atcggcgccccccctgccccggaaaaccagcagtttcaatacactgttacggcccagggc
cgtcttgcgacggtcgccgagttcgaaaacatcatcatccgcaccggcgattcaggcagc
gttctgcggatgaaggatatcgcgcgcattgaacttggggccagttcctacagcgtctcc
ggccagtacgagggccagccagcgaccgtcatcgccgtctatcaggcaccgggcgagaac
gcgctgagcgtggccgaaggggtctacgccgaacttgaccgcctctcgcaggcctttccc
gacgatattgcctatgaggtcccgtttgacagcactgattttgtggaacaatccctcaac
gatgttgtatcaacgctgatcctgacgttcattctggtgatgtccgtggtctttgtcttt
ctgggcagcgcgcgcgccacgctgatcccggccgtggccatcccggtttccctgatcggc
acctttgcgtttcttttgttgatgggcatgacgctgaacacgatctcgctttttgcactt
gtgcttgcgattggtatcgtcgtggatgacgccatcatcgtggtcgaaaacgtcgaacgc
gtaatcgccgaagagggtctcagcccgcctgaagcgaccgccaaggcgatgacgcaaatc
acaacgccagtcatcgcgacgacattggttctcctggcggtctttgtgcccgtcaccttc
atgccggggatttcagggcagttgttctctcaatttgcggtcaccatttccgtggctgtg
gtgatttcctcgattaatgcgctgacgctgtcacctgccctctgcgcgattgtcctgaaa
aaacgcagcggcccgccaagggggctgctggccagctttgaaaaagtcatcggtggtttg
cgcgatggatacgccgggattgttggccgtcttgtccgcttgcccattctcgggctcgcc
attctgattgcgctcgggctcgggtcaggttccatgatgggctccttacccaaaggcttc
ctgccgctcgaagacaatggatatgtttttgtcgatatccagctgcccgatgcctcgacc
cttcagcgtaccgaagtcgtctcagaccggctcaacacgcagatccgcgcccttggcggc
gttgcaaacacggttcaggtcaacgggttcagcctgctgaatggtgtcggctcaaatggg
gcgatgatcattgtcaacctcgacaactgggaggaacgacaggacccgagcctcagcgct
gatggcatccttgcacagatattcggcatcgcggcacaagaggcctcggcaaaggtactt
gccttcaacccgccgccaatcagcggattgggggtcagtgcgggcgtcgaaatgaaagtg
caacagaccggtggcggggcggcaaacgacctctcggcggctgtcaattcgcttgttttc
gccgccaatcaacgccccgagatcgcgcaggcctacaccagtttcagcgcgaatgtgccc
aagctctttgtggaccttgaccgcgaaaaaacgaggaccctcgggattcctgtcagcgat
gtgtttgaaacccttcaggcgcatctcgggtcgatctatgtgaacgatctgaacctcttt
ggtaaggtgtaccgcgtgatgatacaggcggatgcgtccttcagagacacggttgaggat
atcggaaggctgcatgtgcgcacgcaagacggcgaaatggcacccctgtccaccctgatt
gacgtggaaaaagtgctagggccggtgctgctcaaccgctacaacctgtttcgcgccgcc
actgtaacggctgttccggcggcgggctattcgacgggggatgccatcgcggtgcttcag
gaagaggcgctcacagcgctgccgcccggatatgcctatgaatggaccgggaccgcacag
caacagcttgatgcaggtggtacggttattctggttttggccgccgcgatcatctttggc
tatctgtttttggtggcgcaatatgaaagctggacgatgccgctgggcattctgctgtcg
gtcactgttgccttgtttggggcgctggcggccgttctcgtcacagcgggcgatgttaat
ctttacacgcagatcgggatgatcatgctgatcgggcttgcgtccaagaatgccattctg
attgtggaattcgccatggaagaacgcgccaatggcgcgagcattcgcgaagcggcactg
caagcggcccgccagcggttccgcgctgtgatgatgacggcgctgtctttccttttgggc
gtcgtaccgctgctggttgcgtcaggcgcgggggccgccagtcaaaaggccatcggtatt
gcagtatttggtggcatgttggccgcaacggtgatcggcgtcatcgtggtgccggttctt
tatgtcctgctgcaatccgtgcgggaaaaggtcaaaggcatgctcaaacacaaggatgtg
accgccaactaa
DBGET
integrated database retrieval system
