Roseobacter denitrificans: RD1_3325
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Entry
RD1_3325 CDS
T00376
Symbol
glcB
Name
(GenBank) malate synthase G
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00620
Pyruvate metabolism
rde00630
Glyoxylate and dicarboxylate metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RD1_3325 (glcB)
00630 Glyoxylate and dicarboxylate metabolism
RD1_3325 (glcB)
Enzymes [BR:
rde01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
RD1_3325 (glcB)
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MSG_insertion
MS_C
MS_N
Motif
Other DBs
NCBI-ProteinID:
ABG32824
RoseoBase:
RD1_3325
UniProt:
Q163L9
LinkDB
All DBs
Position
complement(3188847..3190994)
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AA seq
715 aa
AA seq
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MTGFQTRHELQVADVLVSFIEESALPGTDIKASDFWKGLSDLVHEFGPENRALLEQRAAI
QSKIDDWHIAHRDQPHDHEAYSAFLREIGYLVEEGPDFEIDTANVDPEIASVPGPQLVVP
ITNARYALNAANARWGSLYDGFYGTDAMGSPAPKGGYDQGRGARVVARARVFLDEAFPIV
GTSHADARRYIVHKGALLVDDQPLVSPEKFIGYTGHPKAPDSIVLRNNGLHVKLVFDRTH
AIGGRDQAGLADVQMESAVSAIMDCEDSVACVDAEDKVVAYANWLGLMKGDLEESFEKGG
QTLTRRLNGDLTLTGPDDGEVVLKGRALMLVRNVGHLMTNPAILDRDGNEVFEGLMDAMI
TTLIAMHDLKRAGGNSLTGSVYVVKPKMHGPQEVAFADRTFTHVENVLGLPQYTVKLGIM
DEERRTSVNLKECIRAAKSRVAFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKAWIGAY
ENQNVDIGLECGLSGRAQIGKGMWAMPDLMAAMLEQKIEHPKSGANCAWVPSPTAATLHA
LHYHKVDVFAVQQKLRAGGRRAYVDTVLDIPLATYQKWTPEQVRREVENNAQGILGYVVR
WVDQGVGCSKVPDMNDVGLMEDRATCRISAQHIANWLHHGVVDAQDVMAALRKMAQVVDA
QNADDPLYVPMAPGFDGIAFQAACDLVFKGRVQPSGYTEPVLHARRLELKARAQG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatttcagaccagacatgaactgcaggtcgctgatgtacttgtctctttcata
gaagaaagcgcattgcccggcacagacataaaggcgtctgatttctggaaagggctgtcg
gaccttgtgcatgagtttggcccggaaaaccgcgcattgctggaacagcgcgcggccatt
cagtccaagatcgatgactggcacatcgcacatcgcgaccagccccatgaccacgaggcc
tattccgcgtttctgcgcgagatcgggtatctggttgaagagggtcccgactttgaaatc
gacacggcgaatgttgatcccgagattgccagcgtgccgggtccgcagcttgtggtgccc
atcaccaatgcacgttacgcgctgaatgcggcgaacgcgcgttggggcagcttgtatgac
gggttttatggcaccgatgccatgggctctccggcgcccaagggtgggtatgatcagggg
cgcggtgcgcgcgtggttgcacgtgcgcgggtgtttctggacgaggcgtttccgattgtc
gggaccagtcacgccgatgcgcgccgctacatcgtgcacaaaggggccttgctggtggac
gaccaaccccttgtcagcccggaaaaattcatcggttacacgggccatcccaaagcgccc
gacagcattgttctgcgtaacaatggcttgcacgtgaaactggtctttgaccgcacccat
gccattggtgggcgcgatcaggcagggcttgccgatgtgcagatggaaagtgcggtctcc
gcgatcatggattgcgaggattccgtcgcctgtgtggatgccgaagataaagtcgtcgcc
tatgccaactggcttggcctgatgaagggcgacctcgaggaatcctttgaaaagggcggt
cagacgctgacccggcggctcaacggtgatctgaccctgaccgggccggacgacggggag
gtcgtattgaaaggccgggccttgatgttggtgcgcaatgtcggtcatctgatgaccaac
ccggccattcttgatcgcgacggcaacgaggtctttgagggcctgatggacgccatgatc
accacgttgatcgcgatgcatgatctcaagcgggcggggggcaattcgctgaccgggtcc
gtctatgtggtcaaacccaagatgcacggacctcaggaggtcgcctttgcggatcgcacg
ttcacgcatgtcgagaacgtgcttggcctgccgcaatacacggtcaagctgggcatcatg
gatgaagagcggcgcacgtccgtgaacctgaaagaatgcattcgcgccgccaaatcgcgg
gtcgctttcatcaataccgggttcctggaccggacgggcgatgaaatccacacctcgatg
gaggcagggcccttcagccgcaaggacttcatcaagcgcaaggcgtggattggcgcctat
gaaaaccagaacgtggatatcggtctggaatgtggtctttcggggcgcgcgcagatcggc
aagggcatgtgggccatgccggaccttatggccgcgatgctggagcaaaagatcgaacac
cccaaatcaggggcaaactgtgcctgggtgcccagcccgacggcggcgacgctgcatgcg
ctgcattatcacaaggtcgacgtctttgcggtgcagcaaaaactgcgcgcgggcgggcgg
cgggcctatgtggacacggtgctggatattccgctggcaacctatcagaaatggacaccg
gaacaggtgcgccgcgaagttgagaacaatgcgcagggaattctgggctatgtggtgcgc
tgggtcgatcagggggttgggtgttccaaagtaccggatatgaacgatgtgggcctgatg
gaggaccgcgccacctgtcgtatttcggcgcagcatatcgcgaactggctgcatcacggt
gttgtggatgcgcaggacgtgatggccgcgctgcgcaagatggcgcaggtggtggatgcg
cagaacgcagacgatccgctctatgtgccgatggctccgggatttgacggcatcgcgttt
caggcggcgtgcgatctggtgttcaagggtcgtgtgcagccatcgggctatacggaaccg
gttctgcacgcacgtcggcttgagttgaaggcccgggcgcagggctga
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