Roseobacter denitrificans: RD1_B0003
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Entry
RD1_B0003 CDS
T00376
Name
(GenBank) conserved domain protein
Organism
rde
Roseobacter denitrificans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SASA
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
ABI93412
RoseoBase_p2:
RD1_B0003
UniProt:
Q07GI7
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Position
pTB2:1298..3151
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AA seq
617 aa
AA seq
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MPDNFLIVPSADVQGGRLTTLSNAISTTDLNLTVTGLSNDTELVVYQLSTGVIGTPQAAA
QPRETHVFALMGQSNMIGRAAFDGGAKWPDGTLQIGRGGDEDGAIIPARNPADGPATSRP
LAHTGARLGNMGLDIQFAIDYLSDKPDVTLLFIPCAQGATGFSNGAWNPGDWLYNRETAR
INAAMNANPEFLFQGFLWHQGETDTGIPGTYGGLLDNLIAGLRRDVTAATPTTPFILGGL
AAGNAGRDAITGIIAATPGRVPYTAFAPTADLSLTDANHFDAASFRTLGARYAAALASAA
ANQPGAPGIPTGLSAVAGDTEVTLSWSAPANTGGTALSDYIIERDSGSGFAALADGTGTT
TGYTDSGLSNGTTYAYRVRAVNGTGTGAATPPQSATPAAPATGPVAEAGAQAHWLFGADN
PTYADLVSGRIATGPAHALEAAYMTSPAGIRQGRDTGIAEADAQTMCFVFQLAGSANSMI
GGTLTTSGSNGVSPYTSATTGIYANMRGGWGNPAISSASPYRTQFVFAAVSKNVATGNYV
LFAGNGAGHDVLTGTSAQTTSPRTIGIGNLHFDRANFSGQISIAEAILFDSAKTEIELTE
IYDRSRTRLAARGLTVV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaattttctcatcgtcccatccgcagatgtgcaggggggcaggctcaccacg
ctgagcaatgcgatctcgaccaccgatctgaacctgaccgtcaccgggctgagcaatgac
accgaactggtggtctaccagctcagcaccggcgtgatcggcacgccgcaggctgcagcg
caaccgcgcgagacccatgtctttgcgctgatgggccagtccaacatgatcggccgtgcc
gcttttgatggcggcgcgaaatggcccgacggcacgctgcagatcgggcggggcggggac
gaggacggcgccatcatcccggcccgcaaccccgccgacgggcctgcgacgtcgcgcccg
ctggcgcatacgggcgcaaggctggggaacatggggctcgatatccagtttgcgatcgac
tacctttcggacaagcccgatgtcaccttgctgttcatcccctgcgcgcagggggccacc
ggattttcaaacggcgcatggaacccgggcgactggctctacaatcgcgaaaccgcccgg
atcaacgcggcgatgaacgccaatcccgaatttctgttccagggcttcctgtggcatcag
ggagagacggatacgggcattcccggcacctatggcggtctgctcgacaatctgatcgcg
ggtctgcgccgcgatgtaacggcggcgacacccacgacccccttcattctgggcgggctg
gccgcaggcaatgcgggacgcgatgccatcaccgggatcatcgccgccacgccgggtcgt
gtgccctatacggcctttgcgcccaccgctgatctgagcctgacggacgccaatcatttt
gatgcggcttccttccgcacccttggcgcgcgctatgctgccgcccttgccagcgccgcc
gcgaaccagcccggcgcgccgggcatccccacgggcctcagcgccgttgcaggtgacaca
gaggtcaccctgtcctggagcgcacctgcaaacaccggtggcacggccctgtccgattac
atcatcgaacgcgacagcgggtccggctttgcagccttggccgacggcacgggcaccacc
actggctataccgacagcgggctgagcaatggcacgacctatgcctaccgggtgcgcgcg
gtgaatggcaccggaacgggggcggccacccccccacagagcgcgacgcctgcggccccc
gcgaccggccctgtggccgaggcgggtgcgcaggcccattggctctttggcgccgacaat
cccacatatgccgatctggtcagtgggcggatcgcaacaggccccgcccatgccctggag
gctgcctatatgaccagccctgcggggatcaggcaggggcgcgatacagggattgcagag
gcggatgcgcagaccatgtgttttgtgttccagctggcgggcagcgccaactccatgatc
ggcggcacgctcaccacatcgggcagcaatggcgtctcgccctataccagcgcaaccacg
ggcatctacgccaacatgcgcggcgggtggggcaatccagcgatcagttcggcatccccc
tacagaacccagtttgtctttgcggccgtgtccaagaacgtggcaacgggcaactatgtg
ctctttgcaggcaatggggcaggccacgacgtcctgaccggcacatcggcccagacgacc
tcgccgcgcaccatcgggatcggcaacctgcatttcgaccgcgccaatttcagcggccag
atttccatcgcagaggcgatcctctttgacagcgccaagaccgaaattgaactgacagag
atctacgaccgcagccgcacccgtctggcagcacgcgggctgacggtggtttga
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