Rhizorhabdus dicambivorans: CMV14_04960
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Entry
CMV14_04960 CDS
T05084
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
rdi
Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rdi03000
]
CMV14_04960
Transcription factors [BR:
rdi03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CMV14_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
HTH_36
MarR
RP-C
DprA_WH
TrmB
HTH_20
Rrf2
HTH_24
UNC80
Motif
Other DBs
NCBI-ProteinID:
ATE63821
UniProt:
A0A2A4FSI8
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All DBs
Position
1030623..1031405
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AA seq
260 aa
AA seq
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MSSSPTASPRSVDKSLALLVQVIEGGAFPSMSALARAADLPVSTVHRLLAGLEQAGFVAR
LERGHYVGGPTLRRLARRQDDSAKILAQIGGPILARLSRRTGRICHLGILEENMMTYLVK
EGDAEDNAVSRLGMQLEAYCTGLGKALLAHLPENERELFVAGGGFVALTPSTLTTPSAFR
DEFARIRERGYALDQEEMVPGLVCIAVPIRAMDRVVAAISLVVTQSAEPRRPTSYLGRLH
AAAREIETRLHPFADMLVAA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcccccaccgcatcgccccgatcggtcgacaagtcgctcgcgctgctggtg
caggtgatcgaaggcggagcattcccatcgatgtcggcgcttgcccgcgcggccgatctg
cccgtctcgaccgtccatcggctgctggccgggctcgaacaggccggcttcgtcgcccgg
ctggagcgcggccattatgtcggtggccccaccctgcgccggctggcgcggcggcaggac
gattccgccaagatattggcccagatcggtgggccgatcctggcgcggctgtcgcggcgg
accggccggatctgccatctcggcatcctcgaggagaatatgatgacctatctggtgaag
gagggcgacgccgaggacaatgcggtatcgcggctcggcatgcagctggaggcctattgc
acgggcctgggcaaggcgctgcttgcccatctgccggaaaatgagcgcgagctgttcgtg
gccggaggcggcttcgtggcgctgacgccgagtacgctgacgacgccttcggcgttccgg
gacgagttcgcccgtatccgcgagcgtggctatgcgctggaccaggaggagatggtcccg
ggcctggtctgcatcgccgtgccgatccgcgccatggaccgggtggtcgccgccatatcg
ctggtggtgacccagagcgccgagccgcgtcggccgacctcctatctgggccggctccac
gccgccgcgcgcgagatcgaaacgaggctgcaccccttcgccgacatgctcgtcgcggcc
tga
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