Rothia dentocariosa: HMPREF0733_11436
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Entry
HMPREF0733_11436 CDS
T01343
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00521
Streptomycin biosynthesis
rdn00523
Polyketide sugar unit biosynthesis
rdn00525
Acarbose and validamycin biosynthesis
rdn00541
O-Antigen nucleotide sugar biosynthesis
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01250
Biosynthesis of nucleotide sugars
Module
rdn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HMPREF0733_11436 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HMPREF0733_11436 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HMPREF0733_11436 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HMPREF0733_11436 (rfbB)
00525 Acarbose and validamycin biosynthesis
HMPREF0733_11436 (rfbB)
Enzymes [BR:
rdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HMPREF0733_11436 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Sacchrp_dh_NADP
NAD_binding_10
adh_short
NmrA
KR
ApbA
Motif
Other DBs
NCBI-ProteinID:
ADP40893
UniProt:
E3H5W3
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All DBs
Position
1572021..1573019
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AA seq
332 aa
AA seq
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MSHLLVTGGAGFIGSNFVHYLLDNTEHTVTVLDKMTYAANKTSLNGLDGTRFNLMVGDIA
DRELTDELVAQADAVIHYAAESHNDNSLANPEPFIHTNLVGTFTLLEAVRRHGTRYHHIS
TDEVFGDLALEDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGIEATISNCSNNYG
PYQHIEKFIPRQITNILSGLTPKLYGEGLNVRDWIHASDHSSAVLRILESGKIGETYLIG
ADGEENNITVLRTILRLMGKDENDFEHVIDRPGHDMRYAIDGTRLREELGWEPQFTDFEA
GLADTIAWYTDNRSWWEPLKAEVEAKYAKAGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttactcgttaccggcggtgccggattcattggctctaactttgttcattat
ctattggataatactgaacacactgttacagtactcgataaaatgacctatgccgccaat
aaaacctcgcttaatggtcttgacggcaccagatttaaccttatggttggcgatattgca
gaccgtgaactcactgacgagctcgtagcgcaggcagatgcagtcatccattacgccgca
gaatcccataacgataactccctggcgaacccagaaccttttattcacaccaacttagtc
ggcacgtttaccctgctggaggcggtacgcagacacggaacccgctatcaccacatctcg
accgatgaagtcttcggtgatttggcgctggaggaccccgcaaagttcaccgaaactacg
ccctataacccgtcatccccgtattcttccaccaaggcaggttcggatctgctggtgcgc
gcctgggtgcgttctttcgggattgaggcgaccatctcgaactgctcgaataactacggg
ccgtatcagcacatcgaaaaatttattccccggcagattacgaatatcctctcggggctg
acccctaagctctacggcgagggcctgaacgtgcgcgactggattcacgcatccgatcat
tcttcggcggtgctgcgcatccttgaatccgggaaaattggcgagacctacctcatcggt
gcagacggcgaggagaataacattaccgtgctgcgtactattcttcgcctcatgggtaaa
gacgagaacgactttgaacatgtgatagaccgtcccgggcacgatatgcggtatgccatt
gacggcacccgtctgcgcgaagaactcgggtgggaaccgcagttcaccgactttgaggcg
ggtcttgccgataccatcgcgtggtataccgataaccgttcctggtgggaaccgctcaaa
gcagaagttgaggctaaatacgcgaaggcggggcagtaa
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