Roseateles depolymerans: RD2015_1484
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Entry
RD2015_1484 CDS
T04166
Name
(GenBank) Pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rdp03009
]
RD2015_1484
Enzymes [BR:
rdp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RD2015_1484
Ribosome biogenesis [BR:
rdp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RD2015_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
ALV05969
UniProt:
A0A0U2U0W8
LinkDB
All DBs
Position
1747162..1749381
Genome browser
AA seq
739 aa
AA seq
DB search
MNSNDIDDSKPDALNAAATDATPDAPAKPKRTRKTAAAAPAEATDAAAPAAEDAPKPRTR
RKAAAPAEAAEAAPAAEASAAAPADAASSDEEAAAKPKRRTRAKAAATDDASAAVSLDAA
ATPAVATPPQARTDVAAAVTPESAPAAATGPRFTLGDEVVAEPVHGEEAASASEEGDDGD
RGPRQGRNRRGRGRNRDGREARDGAPDGAQAAADGTLAAEAPSADTAELQALAQARFDDL
LSGAFDADVDAGAQAGAQASADDEASDDADALADQDGDAGADAPANKRVLAPEPDAPKLQ
KVLAQAGVGSRRDIEDMIAKGQITVNGEVAHVGQRISYGDRVAVAGKPIKVRIAPAAPRI
LAYHKPVGEVVTFNDPEGRPTVFRNLPRLPQGKWQSVGRLDLNTEGLLLFTNSGELANQL
MHPRFGVEREYAVRVLGSLSNEQKNTLLTGVDVDGQQASFKSIVDGGGEGVNRWYRVVIT
EGRNREVRKLFETVGLAVSRLIRIRYGTVVLPRGLRRGVYVELGDADVRIIRQLAGHVQQ
ERSDRGDRGGDRGDRNAKRRRGGGNGGPRPSRPEPRQERADRPDRGEYRQQESRQQEPRQ
YEPRQHDQRQHEQRAQHQQRPQQERERERDRDRPRREEDDDDFIPRHVNPLEQTFDRRFA
TSGKRGIPAGFGRGGSDPQHNGGRGGNARGPGGERQPDPMKTSIGYIGADAFINRNNRGG
RRGGGGGGGGGGGGGRGRR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaacgatattgacgattccaagcccgacgcgctgaacgcagctgcgacggat
gcgacccctgatgcgccggccaagcccaagcgcacccgcaagacggccgccgccgcgcct
gcagaggcgacggatgcggcagcgcctgcggccgaggacgcgcccaagccgcgcacgcgc
cgcaaggcggctgcacctgcagaggccgcagaggctgcgcccgccgccgaagcgagcgca
gcggctccggccgatgccgcgtcttcggacgaagaggccgccgccaagcccaagcgccgc
acccgcgccaaggccgcagcgaccgatgacgcatcggcggctgtgtccctggacgccgct
gccacgccggccgtggccactccgccccaggctcgcaccgatgtggctgcggccgtgacg
cccgagtccgcccccgcggcggcgacgggcccccgtttcacgctcggcgacgaagtggtg
gctgagccggtgcacggcgaagaagcggcttcggcctctgaagagggggacgatggtgat
cgtggtccgcgtcagggccgcaatcgccgcggccgtggtcgcaaccgtgacggccgcgag
gcgcgtgacggcgctcctgatggcgcacaagccgctgccgacggcacgctggccgccgag
gcaccgtccgccgataccgccgagctgcaagccctggcacaggcccgcttcgatgacctg
ctctccggcgccttcgacgcggacgtggatgctggcgcccaagccggcgcccaggcatcg
gccgacgacgaggcctccgatgacgccgacgccctggccgaccaggacggcgacgccggt
gccgatgcccccgccaacaagcgggtgctcgcgcccgagccggacgctcccaagctgcag
aaggtgctggcccaggccggtgtcggctcgcgccgggacatcgaggacatgattgccaag
ggccagatcaccgtgaacggtgaagtggcccatgtgggtcagcgcatctcctacggcgac
cgcgtggcggtggccggcaagccgatcaaggtgcgcattgcccccgcggcgccgcgcatc
ctggcctatcacaagccggtgggcgaagtggtgaccttcaacgacccggaaggccgtccg
acggtgttccgcaacctcccgcgcctgccccagggcaagtggcagtcggtcggtcgcctg
gacctgaataccgaaggcctgctgctgttcaccaactccggtgaactggccaatcagctg
atgcacccgcgctttggcgtggaacgcgaatatgcggtgcgcgtgctgggctcgctgagc
aatgagcagaagaacacgctgctgaccggcgtggacgtggatggccagcaggccagcttc
aagagcatcgtcgatggcggcggtgaaggcgtgaaccgctggtaccgcgtggtcatcacc
gaaggccgcaaccgcgaagtgcgcaagctgttcgagacggtgggcctggcggtgagccgc
ctgatccgcatccgttacggcaccgtcgtgctgccgcgcggcctgcgccgcggcgtgtat
gtggagctcggcgacgccgacgtccgcatcatccgccaactggccggccatgtgcagcag
gaacgttcggaccgcggtgatcgcggcggcgaccggggtgaccgcaatgccaagcgccgt
cgtggcggtggcaacggcggcccgcgcccgagccgtcccgaaccccgccaggaacgcgcc
gaccggccggaccgtggcgagtatcgtcagcaggagtcgcgccagcaggagccgcgtcag
tacgagccgcgccagcatgaccagcgccagcacgagcaacgcgcccagcatcagcagcgt
ccgcagcaggaacgcgaacgcgagcgcgatcgtgaccgtccgcgccgcgaagaggatgat
gacgacttcatcccgcgccatgtcaatccgctggagcagaccttcgaccgccgtttcgcc
accagtggcaagcgcggcattccggccggtttcggccggggtggcagcgatccgcagcac
aacggcggccggggtggcaatgcccgcggtcccggcggcgagcgccagccggacccgatg
aagacatcgatcggctatatcggcgctgatgctttcattaaccgcaacaatcgcggcggt
cgccgtgggggtggcggcggagggggcggcggcggtggcggtggacgcggccggcgctga
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integrated database retrieval system
