Rhodococcus erythropolis BG43: XU06_16420
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Entry
XU06_16420 CDS
T03842
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb00250
Alanine, aspartate and glutamate metabolism
reb00410
beta-Alanine metabolism
reb00430
Taurine and hypotaurine metabolism
reb00650
Butanoate metabolism
reb01100
Metabolic pathways
reb01110
Biosynthesis of secondary metabolites
reb01120
Microbial metabolism in diverse environments
reb02024
Quorum sensing
Module
reb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XU06_16420
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XU06_16420
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XU06_16420
00430 Taurine and hypotaurine metabolism
XU06_16420
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XU06_16420
Enzymes [BR:
reb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
XU06_16420
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SAM_1
Motif
Other DBs
NCBI-ProteinID:
AKD98129
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All DBs
Position
3610038..3611429
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AA seq
463 aa
AA seq
DB search
MPEPRRSDHTDYVAVNPIFSRPGEDSVASKYTLEPDGMLPETAYQIVHDETMLDGNARLN
LATFVSTWMDDHATKLYAESFDKNMIDKDEYPQTAAIETYCWRILADLWHSPSPKDAIGT
STIGSSEACMLGGLAMKRRWQHARKAAGKSTEKPNLIMSSAVQVCWEKFCNYWDVEARYV
PISEEHRTLDGHDLDKYVDENTIGVIAIMGVTYTGMYEPVLEISKALDAIQEKTGLDVPI
HVDGASGAMIAPFLQPELEWDFRLPRVHSINTSAHKYGLVYPGLGWVVWRSQDLLPDDLV
FKVSYLGGSMPTFALNFSRPGAQVILQFYLFLRLGHDGYRAIQQSSQDVAKFLAEGIGKL
DAFELWNDGSDIPVFAWRLAEGHTSNWTLYDLSDRLRGKGWLVPAYPMPDDLSDLTVQRI
VVRNGLSMDLAANLLRIIEEETAFLDELDSPMPRPRVTEGFHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacccagaaggtcagatcacaccgattacgtagccgtcaatccgatcttctcg
aggcctggcgaggattcggttgcatcgaagtacacactcgaacccgacggcatgcttccc
gagaccgcgtatcagatcgtccacgacgaaacgatgctcgacggcaatgcgcggctcaat
ctcgcgacgttcgtcagcacgtggatggacgatcacgccaccaaactgtatgccgagtcg
ttcgacaagaacatgatcgacaaggacgagtatccacagaccgccgcgatcgaaacctat
tgctggcgcatccttgccgacctctggcactcgccctcccccaaggacgcaatcggtacc
tcgacgatcggttcgtccgaggcgtgcatgctcggtggcctggcgatgaaacgacgctgg
cagcacgcacgaaaagccgcggggaagtccaccgaaaaaccaaatctcatcatgagttcc
gccgtccaggtgtgctgggagaaattctgcaactactgggacgtcgaggcgcgctacgtg
ccgatcagcgaggaacaccggaccctcgacggtcacgatctggacaagtacgtcgacgag
aacaccatcggcgtaatcgcgatcatgggtgtcacgtacaccgggatgtacgagccggtc
ctggaaatctcgaaggcactcgacgcgatccaggaaaagacgggactcgacgttcccatc
cacgtcgacggcgcttccggcgcaatgatcgccccgttcctacagccggaactcgaatgg
gatttccggctcccgcgcgtgcactccatcaacacctcggcgcacaagtacggactcgtc
taccccggcctcggctgggtggtctggcgatcgcaggatctacttcccgacgacctcgtg
ttcaaggtgagctacctcggcggcagtatgccgaccttcgcgctgaacttctcgcggccc
ggcgctcaggtgatcctgcagttctacttgttcctgcgtctcggccacgacggctatcgc
gcgatccagcagtcctcacaggacgtggcgaaattcctcgccgaaggaatcgggaaactg
gacgccttcgaactgtggaacgacggttccgacatcccggtcttcgcgtggcgcctcgcc
gagggccacacgtccaactggacgctgtacgacctgtccgaccgactgcggggcaagggc
tggttggtgccggcctatcccatgccggacgatctctcggatctgacagtgcagcgcatc
gtggttcgtaacggactgagcatggacctggcagccaatctgctgcgcatcatcgaagag
gaaaccgcgttcctcgacgaactcgacagcccgatgccgcggccacgcgtcaccgaggga
ttccatcactga
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