Reichenbachiella agarivorans: N6H18_09935
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Entry
N6H18_09935 CDS
T08483
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
rek
Reichenbachiella agarivorans
Pathway
rek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N6H18_09935 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rek03019
]
N6H18_09935 (rny)
Messenger RNA biogenesis [BR:
rek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N6H18_09935 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
DUF4954
Motif
Other DBs
NCBI-ProteinID:
UXP30673
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Position
2384921..2386483
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AA seq
520 aa
AA seq
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MESTIYIIIAIAGISIGFAINKILVKRAEGKKINEAESRAEIILKEATIDAENIKKERII
EAKEKFLKMKSEFEEESNRKKNQIIANENKVKQRESQLSKQFEQNKRAEAELESQKENLE
AQLEILKRRKEELDKKQEEQTMALEKISNLSASEAIEQLKETLKDEARTKASSHIKDIIE
EAKLTATKEAKKIVIQTIQRTATEHAIENCVSIFNIESDDVKGKIIGREGRNIRALEAAT
GVEIIVDDTPEAIIISGFDPVRREVARLSLHRLVTDGRIHPARIEEIVAKTTKNIEEEIV
EIGERTVIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVAKLCATLAAELGLNAKL
AKRAGLLHDIGKVWPEEPEQPHAILGMELAMKYKENKEVCNAIGAHHDEIEMTSLISPIV
QTCDAISGSRPGARREVMESYIKRLKDLEALALGFEGVHKCYAIQAGRELRVLVDADNVS
DKQASDLSFGISSKIENDMQYPGQIKVTVIREMRSISYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtacaatttatattatcatcgcgattgctgggatatccattggatttgcaatc
aataaaattttggtcaaaagggctgaaggcaaaaagatcaacgaagcagaaagtagagca
gaaatcatcttgaaggaagccactattgatgcggaaaatatcaaaaaggaacggatcatt
gaggcaaaggagaagttcctgaaaatgaagtctgagttcgaggaagaatcgaatcgcaaa
aagaatcaaatcattgccaacgaaaacaaggtcaagcaacgggaaagtcaactgtccaaa
cagtttgaacaaaacaaacgagcagaggccgaactagagagtcaaaaggagaatctagag
gcacaattggagattctgaagcgtcgcaaagaagaactggacaaaaagcaagaagagcaa
accatggcattggagaagatttctaatctatctgctagtgaagccatcgagcagctcaaa
gagacactcaaagatgaggcgcgaaccaaagcatcatctcatatcaaggacatcatagag
gaggcaaaactcaccgctaccaaggaagcgaagaagattgtcattcaaacaattcaacgt
acagcgactgagcatgcgatagagaattgcgtatctatcttcaacattgagagtgatgat
gtcaaaggaaaaatcatcggtagagaaggacgaaatattcgtgctttggaagccgctacg
ggtgtagaaatcatagtggatgatacaccagaggcgattattatttcaggttttgatccg
gtcagaagagaagtggcaagactgtctctacacaggctggtgacggacggtagaattcac
cctgcacgtatcgaagagattgtggccaagacgaccaaaaacatcgaagaagaaatcgta
gagatcggagaaagaacggtgattgatcttggaatccacggactgcatcctgagttgatc
aagatggtaggaagaatgagattcagatcgtcatatggtcagaacctgctccaacactct
agagaggtggccaagctttgtgcgacactcgccgcagaactaggcttgaatgcaaaactt
gctaagagagcaggattgctacatgatattgggaaagtttggccagaggagccagagcaa
ccacatgctatcctcgggatggagttggcgatgaaatacaaggaaaacaaagaggtatgc
aatgcgataggtgctcaccatgatgagattgagatgacgtctctgatatctccgattgta
cagacctgtgatgcgatttctggatctagacctggagccagacgtgaggtgatggagtca
tacatcaagcgattgaaggatctagaggccttggcacttgggttcgaaggggtgcacaaa
tgctatgcaatccaggctggacgtgaattgcgtgtactggtagacgcagacaatgtatcc
gataagcaagcgagcgatttgtcttttgggatttcatccaaaatagaaaatgatatgcag
tacccaggtcagatcaaggtgacggtcatccgtgagatgcgatcaatcagttacgcaaag
taa
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