Rhizobium etli bv. mimosae Mim1: REMIM1_CH00925
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Entry
REMIM1_CH00925 CDS
T02778
Name
(GenBank) tRNA (uracil-5-)-methyltransferase protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rel03009
]
REMIM1_CH00925
Enzymes [BR:
rel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
REMIM1_CH00925
Ribosome biogenesis [BR:
rel03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
REMIM1_CH00925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRAM
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Met_10
Motif
Other DBs
NCBI-ProteinID:
AGS20773
UniProt:
S5RSH3
LinkDB
All DBs
Position
complement(963086..964336)
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AA seq
416 aa
AA seq
DB search
MSTETVTIEKLGTQGDGIASDAGGPVYVPFSLPGETVAIARVKSHGTIMSIATPSPERQE
PPCRHFGPDGVNGTCGGCTLQHLADGPYRAFKRQLVVDALKLKGLMPDVAEIVPARPGER
RRVVFAARKTEKDMLIGFNQAESHHIVAIEECPISSVGIVTRLPAIKAIAAALATSAEPF
RIAVLETRSGLDIAVDEIRKLPDPQRRKAIETVLGLRGIARVTLNGEILVEPAKPIVDFG
GVEVSPPAGGFAQATKPAEEAMAELVLAHAGKAKRIADLFAGAGTFSLRLARIGRVHAVE
AEAAALAALDQAARKTQGLKPVSVEKRDLFRRPLMTQELKPYDMVVFDPPRAGAEFQCKE
LARSGVKKIAAVSCNPLTLARDLATLVEGGYRITKVTPIDQFLWTSHVEVVATLEK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgaaaccgtcacgatcgagaaactcggcacccagggcgacggcatcgcaagc
gacgctggcgggcctgtctatgtgcccttttccctgcccggggaaaccgtggcgatcgcc
cgcgtcaaaagccatggcacgatcatgtcgatcgcaacgccctcacccgagcggcaggag
ccgccctgccggcatttcggcccggacggcgtcaacggcacctgcggcggctgcacgctg
cagcatctggcggacggcccctaccgcgccttcaagcggcagctggtcgtcgatgcactg
aaattgaagggcctgatgcctgatgtcgccgagatcgtcccagcccggccgggcgagcgc
cggcgcgtggtgtttgcggcgcgcaagaccgagaaggatatgttgattggctttaaccag
gctgagagccatcatatcgtcgccatcgaagaatgtcccatctcgtcggtcgggatcgtc
acccggctgccggcgatcaaggcgatcgccgctgcgctggcgaccagcgccgaacccttc
cgcatcgcggtgctcgaaacacgctcgggcctcgacattgcagtcgacgagatcaggaaa
ctccctgacccgcagcggcgcaaggcgatcgaaaccgtgctcggcctgcgcggcatcgcc
cgcgtgacgctgaatggcgagatcctcgtcgagccggcaaagccgatcgtcgatttcggc
ggcgtcgaggtttcaccgccggcggggggatttgcccaggcgacgaagccggcggaagag
gcgatggcggagctggtgcttgcccatgccggcaaggccaaacggatcgccgatctcttt
gccggcgccggcacgttttcgctcaggctggcgcggatcggccgggtgcatgcggtcgag
gccgaggcagcggcgcttgccgccctcgaccaggccgcccgcaaaacacaggggctgaag
ccggtgagcgtcgaaaaacgcgacctcttccgccgcccgctgatgacgcaggagctaaag
ccctatgacatggtggtcttcgacccgccgcgcgccggcgcggagttccagtgcaaggaa
ctcgcccgctctggcgtgaagaagatagcagccgtcagctgcaatccgctgacgctggcg
cgagacctcgcgaccctcgtcgagggtggctaccgcatcaccaaggtgacgccgatcgac
cagttcctctggacctcgcatgtcgaggtggtggcgacgctggagaaatag
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