Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_03915
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Entry
EF513_03915 CDS
T05750
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Pathway
ren00521
Streptomycin biosynthesis
ren00523
Polyketide sugar unit biosynthesis
ren00541
O-Antigen nucleotide sugar biosynthesis
ren01100
Metabolic pathways
ren01110
Biosynthesis of secondary metabolites
ren01250
Biosynthesis of nucleotide sugars
Module
ren_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EF513_03915 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EF513_03915 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EF513_03915 (rfbC)
Enzymes [BR:
ren01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EF513_03915 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZL16452
UniProt:
A0A3S8T576
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All DBs
Position
850539..851084
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AA seq
181 aa
AA seq
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MEITSLEIPEVKLIKPQQFSDNRGFFVELFNYQNLKAQGIDFTPLQDNLSFNSYKHTLRG
LHAQLEPYPQAKLVSCLRGSIVDVIVDARRSSKTYGKYVSITLSQDDYSFIYIPCGFLHG
FKTLNDETIVLYKTNNYYAPLNEVGIKWNDPELQIDWGDTTNLIISEKDQQNFLFTEVNV
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
attgaaataacgagccttgaaatacctgaggtaaaactaatcaaacctcaacaattcagc
gataatagaggcttttttgtggaattgtttaattatcaaaatttaaaagcccaaggtatt
gatttcactccactacaagataatttatcatttaattcttacaaacatactttacgtggc
ttgcatgcacagcttgagccctatccccaagctaagttagtatcttgcttaagaggtagt
attgtagatgtaatagttgatgctcgtagaagtagcaaaacttatgggaaatatgtatct
attaccctttctcaagacgattactcttttatatatataccgtgtggatttcttcatggg
tttaaaaccttaaatgatgaaactatagtactgtataaaactaataattattatgcacct
cttaatgaagttggtataaaatggaatgatcctgaattacaaattgactggggagataca
actaatttaattatttcagaaaaagatcaacaaaattttttatttacagaagttaacgtt
gcataa
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