Rhodococcus erythropolis PR4: RER_31000
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Entry
RER_31000 CDS
T00881
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
rer
Rhodococcus erythropolis PR4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAH33808
NITE:
RER_31000
UniProt:
C0ZZM3
LinkDB
All DBs
Position
complement(3334474..3335976)
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AA seq
500 aa
AA seq
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MQESTIDSPTSTEGRSFVDLGIPAVMVHALRRSGIDAPFPIQSATIPDVLAGRDVLGRGA
TGSGKTLAFGLPMLVRLKGGASKRNRPRGLVLAPTRELAIQIHKALDDAATEIGLRVANA
VGGVPIKRQADILARGVDLLIATPGRLLDLLEQKSVILDDVVITTIDEADHMADMGFIDE
VAKILDTTPKDGQRLLFSATLDGKVDDLVAGYLRNPASHSTAPPVATVSTMEHHLLFVDR
DDKRSVVAHIASRAGRTIMFVKTKHGVDRLAQQLHLIGVSAGALHGGKTQNNRTKTLASF
SDGTTPVLVATDVAARGIHVDDVTLVVHVDPPAEAKDYLHRAGRTARAGESGVVVTIVTD
EERDSVEKLTKQAGIKVHGVRVRPDDLELTRITGAMEPTGIPVEAPDTTVAVKHTAKRGR
QEHDTAGRTAAGGRMKKDGDKRAASSRRVTDPKSVKKIRADGTPVPTRSERLASKGLTPR
RGAPGAGKPSAGNRAGKRAH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatcgacgatcgactcgcccacctcgaccgaagggcgttcgttcgtcgacctc
ggaatccccgccgtgatggtgcacgcgttgcgccgtagcggcatcgatgcccccttcccc
attcagtcggcaaccatccccgatgtccttgccggccgcgatgtcctcgggcgcggcgcg
acgggttccggaaagactctggccttcgggcttccgatgctggtgcgcctcaagggcggg
gcgagcaagcggaatcgtccgcgcggtttggtgctcgctcccacccgtgagctggcgatc
cagatccacaaggcactcgacgacgctgctaccgagatcggtttgcgtgtggcaaatgcg
gtcggtggcgttccgatcaagcgtcaggccgacatccttgcccgcggcgtcgatctcctg
atcgcgaccccagggcgcctactcgacctactcgagcagaagtcggtgattctcgacgac
gtcgtgatcacgaccatcgacgaagccgaccacatggcagacatgggtttcatcgacgag
gttgcgaagattctcgacacgacaccgaaagacggtcagcgccttctcttctcggcaaca
ctcgacggcaaggtcgacgatctggtcgcgggttacctgcgcaatccggcgtcgcactcg
actgctcccccggttgccaccgtctcgaccatggagcatcacctgctcttcgtcgaccgc
gacgacaagagatccgttgtcgcacatatcgcttcacgggcgggacggaccatcatgttc
gtcaagaccaagcacggagtggatcgtcttgcgcagcaactgcatttgatcggtgtctcg
gccggcgccctgcacggcggcaagacgcagaacaaccggaccaagaccctcgcgtcgttc
tccgacgggacgacaccggtcctggtcgccaccgatgtcgccgcgcgcggaatccatgtc
gacgacgtgacgctcgtcgttcacgtcgatcccccggcggaggcgaaggactacctgcac
cgggccggccggacggcacgcgccggggaatcaggcgtcgtcgtcaccatcgtcaccgac
gaagaacgtgattcggtcgagaagttgaccaagcaggcaggcatcaaggttcacggcgtg
cgggtccgccccgacgatctggagctcacgcgcatcaccggcgcgatggagccgacggga
ataccggtcgaagctcccgatacgacggtcgccgtcaagcacaccgccaagcgtggccgt
caggaacacgacactgcaggccggaccgctgccggaggccggatgaagaaggacggcgac
aagcgcgccgcttcctcgcggcgcgtcaccgatccgaagagtgtgaagaagatccgtgcg
gacggcactccggtcccgacccgttcggagcgactggcgtccaagggcttgaccccgcgt
cgcggcgcacccggcgcaggaaagccgtctgccggaaatcgggcgggcaagcgcgcacac
tga
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