Rhizobium etli CFN 42: RHE_CH00052
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Entry
RHE_CH00052 CDS
T00317
Symbol
glcB
Name
(GenBank) malate synthase protein
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00620
Pyruvate metabolism
ret00630
Glyoxylate and dicarboxylate metabolism
ret01100
Metabolic pathways
ret01110
Biosynthesis of secondary metabolites
ret01120
Microbial metabolism in diverse environments
ret01200
Carbon metabolism
Module
ret_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RHE_CH00052 (glcB)
00630 Glyoxylate and dicarboxylate metabolism
RHE_CH00052 (glcB)
Enzymes [BR:
ret01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
RHE_CH00052 (glcB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MSG_insertion
MS_C
MS_N
SnoaL_4
Motif
Other DBs
NCBI-ProteinID:
ABC88885
RhizoBase:
RHE_CH00052
UniProt:
Q2KE51
LinkDB
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Position
52942..55113
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AA seq
723 aa
AA seq
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MSRIDKNGLAIETILHDFLTQEVLPGLAIDADRFFADFSAIVHDLAPRNRALLVKRDELQ
TKIDDWYRQHGAPSDMDDYQSFLRSIGYLLPEGSDFQVSTANVDPEIASIAGPQLVVPVM
NARYALNAANARWGSLYDALYGTDAIPENDGAEKGKGYNPKRGEKVIAWVRDFLDAAAPL
QDSRWKDVGSFFVKDGMLVVRSVDGEQTMLGDGGHFAGYRGDAAAPAHILLKNNGIHIDI
VIDPTTAIGKADPAHISDVWLESAITTIMDCEDSIAAVDAEDKVVVYRNWLGLMKGDLQE
EVAKGGTTFLRKLNPDLDYTSPDGASFELHRRSLMLVRNVGHLMTNPAILDKDGNEVPEG
IMDAVITGLIALYDIGPTGRKKNSRTGSMYVVKPKMHGPEEVAFAVEIFSRVEDALGMAR
NTIKMGIMDEERRTTINLKECIRAARERVVFINTGFLDRTGDEIHTSMEAGPMIRKGDMR
QAAWISAYENWNVDIGLECGLSGHAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPS
PTAATLHATHYHRVNVAKVQQGLKDRARARLSDILSVPVAVRPNWTPEEIQRELDNNAQG
ILGYVVRWIDQGVGCSKVPDINNIGLMEDRATLRISAQHMANWLHHKVVTEAQIVETMKR
MAAIVDRQNESDPAYRPMAGNFDDSIAFQAALDLVLKGREQPNGYTEPVLHRRRLELKAK
QSA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcattgataagaacggtcttgccatcgaaaccatccttcatgatttcctgact
caggaggttctgccgggtctggcgatcgatgcggacaggttctttgccgatttttcggcg
atcgtccacgatctcgccccgcgcaatcgcgcgctgctggtcaaacgcgacgagctgcag
acgaagatcgatgactggtatcgccagcatggcgccccgtcggatatggacgactaccag
tcctttctccgcagcatcggctacctcctgccggaaggatcggacttccaggtttcaacc
gcaaacgtcgatcccgaaatcgcctcgatcgccggtccacagcttgtcgttcccgtgatg
aatgcgcgttacgccctgaacgccgccaatgctcgctggggctcgctctatgacgcgctc
tacggcaccgacgccattcccgagaacgacggcgccgagaagggcaagggctacaacccg
aagcgcggcgaaaaggtcatcgcctgggtgcgagatttcctcgatgcggcggcgccgctg
caggacagcagatggaaggatgtcggcagcttcttcgtcaaggacggaatgctcgtcgtc
agatcggtcgacggcgagcagacaatgctcggggatggggggcattttgccggctatcgc
ggtgatgccgcggcgccggcgcatattctcctgaagaacaacggcattcatatcgatatc
gtcatcgacccgacaacggcgatcggcaaggccgatccggcccatatctccgatgtttgg
ttggaatcggcaatcaccacgatcatggactgcgaggattcgattgccgccgtcgatgcc
gaggacaaggtcgtcgtctatcgcaactggctcggcctgatgaagggcgatctgcaggaa
gaggtggcaaagggcggaacgaccttcctccgcaagctcaacccggatctggactatacc
agcccggatggcgcttcgttcgagttgcatcgccgttcattgatgctggtgcgcaatgtc
ggccacctcatgaccaatcccgcgattctcgacaaggacggcaatgaagtgcctgagggc
atcatggatgccgtcataaccggcctgatcgcgctttacgatatcggtcccactggtcgg
aagaagaattcccgcaccggctccatgtatgtggtcaagccgaagatgcatgggcctgag
gaggtcgccttcgccgtcgagattttctcccgggtcgaagacgcgctcggcatggcgcgc
aacaccatcaagatgggcatcatggacgaggagcggcgcacgacgatcaatctcaaggag
tgcatccgcgccgcccgcgagcgtgtcgtcttcatcaataccggcttcctcgaccgcacc
ggcgacgagatccacacttcgatggaagccggtccaatgattcgcaagggcgatatgcgc
caggcagcgtggatatcggcctatgagaactggaacgttgatatcggtctggaatgcggc
ctttccggccatgcccagatcggcaagggcatgtgggcgatgccggatctgatggcggca
atgctggaacagaagatcgcccaccccaaggccggcgccaataccgcttgggtgccttcg
ccgacggctgcaaccctgcatgccacccattatcaccgcgtcaatgtcgccaaggtccag
caggggctgaaggaccgggctcgcgccaggctttccgacattctctccgtgccggttgcg
gtgcggccgaactggacgccggaggaaatccagcgagagctcgacaacaatgcccagggt
atcctcggctatgtcgtgcgctggatcgatcagggcgtcggctgctcgaaagtgcccgac
atcaacaatatcggcctgatggaggatcgcgcgaccttgcgcatttcggcccagcacatg
gcgaattggctgcatcacaaggtcgtcaccgaagctcagatcgtcgaaacaatgaaacgc
atggctgccatcgtcgaccgccagaacgaatccgatccagcctaccggccgatggccggc
aatttcgatgattcgatcgctttccaggccgccctcgatctcgtcctgaagggcagggag
caaccgaacggctatactgaaccggtgcttcaccgccgccgcctcgagctcaaggcgaaa
caatcggcgtga
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