Rhizobium etli CFN 42: RHE_CH00911
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Entry
RHE_CH00911 CDS
T00317
Symbol
tlyA
Name
(GenBank) hemolysin protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ret03009
]
RHE_CH00911 (tlyA)
Enzymes [BR:
ret01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
RHE_CH00911 (tlyA)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
RHE_CH00911 (tlyA)
Ribosome biogenesis [BR:
ret03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RHE_CH00911 (tlyA)
23S rRNA modification factors
RHE_CH00911 (tlyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_12
S4_2
Motif
Other DBs
NCBI-ProteinID:
ABC89722
RhizoBase:
RHE_CH00911
UniProt:
Q2KBR4
LinkDB
All DBs
Position
complement(958993..959739)
Genome browser
AA seq
248 aa
AA seq
DB search
MSDQNSQRLDQLLVSRGLFASRSRARDAVQRGTVRIGGQLVTKAGALFRDDADIAIDDPA
QDYVSRAALKLAAALDQFRLDPAGHHCLDIGASTGGFTEVLLQRGAAHVTAIDVGHGQMH
PRISADPRVTNREGVNARNLTADDIGQPATFIVSDVSFISLKLALAPALDLAAPGAVAVL
LVKPQFEAGREAIGKGGLLKDPASAPAVASELERWFTEDMGWNSLGLIPSPISGGDGNRE
YLLAGLKP
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcaaaacagtcaacgcctcgaccagctgctcgtctcccgcggcctctttgcc
agccgctcgcgggcgcgcgacgccgtgcagcgcggcacggtgcggatcggcggccagctg
gtgacgaaggccggcgcactctttcgcgacgacgccgatatcgcgattgacgatccggcg
caggattacgtctcgcgcgccgccctgaaactcgccgccgcgctcgatcaattccggctc
gatcccgccggccatcactgtctcgatatcggcgcctccaccggcggcttcaccgaggtg
ctgctgcagcgtggagcggcgcatgtcacggcgatcgatgtcggccacgggcagatgcat
cctcggatctcggccgatccgcgggtgacgaaccgcgagggcgtcaacgcccgcaacctg
acggctgacgatatcggccagcccgccaccttcatcgtctccgatgtctccttcatctcg
ctgaagctggcgctggctccggcgctcgatctcgccgcgccgggtgccgtcgccgtgctg
ctggtcaagccgcagttcgaggccgggcgcgaggcgatcggcaagggcggactgttgaag
gaccccgcctccgcacccgccgtcgcctccgaactggagcgctggttcaccgaggacatg
ggctggaacagcctcggcctcatcccctccccgatatcaggcggcgacggcaatcgggaa
taccttctggcaggattgaaaccgtga
DBGET
integrated database retrieval system
