Rhizobium etli CFN 42: RHE_CH01380
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Entry
RHE_CH01380 CDS
T00317
Name
(GenBank) probable murein transglycosylase protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
RHE_CH01380
Enzymes [BR:
ret01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RHE_CH01380
Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RHE_CH01380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
Motif
Other DBs
NCBI-ProteinID:
ABC90183
RhizoBase:
RHE_CH01380
UniProt:
Q2KAF3
LinkDB
All DBs
Position
complement(1454103..1456178)
Genome browser
AA seq
691 aa
AA seq
DB search
MKKAVLILTAFGFVAAAWGSLASPLSGEGIPTPDVKPIDFVPETSIPAALTTGAIPRNPA
VAPVASDLKTGLDALSAKNPQLALSIRDSMREGTLDRHILTWAIAVSGLKGVPSYEIASA
AQKLKGWPGLSRLRAYSERALYDENPAPSAVLAAFGDTAPETMQGAVILGRALTASGKQA
QAAKYIRKVWRTEALDKASEDKILLEFSALLTPADHKARMDYLMYRGRVAQAKRFGDMGE
AQSLYKAWAAVDAKAANAGALLNSVEPKWRGDAGLLFARIEYLRKQDKYAEAAALLEKMP
REPGELVNSGEWWNEQRIVSRGLVDQGQFRPAYRVVANSAATSPTDIVEAEFHAGWYALR
GLQDPTTAEKHFRKILATSNGPISVSRAWYWLGRAAEAGGTGNSGEFYGKAANFPGTFYG
QLAAERLGRKTLNVSYPTPSAADRQSFEAREAVQAIARLEAAGHGWRADILYLALADQLQ
SRGELAILAAQAEQSGNHHLSLQIGKIAYGRGIDVAALAFPVGVIPANANISGSGKALAY
AIARQESAFNPAAVSAANARGLLQLLPGTAQAVAKRHNITFSKDKLTADAGYNATLGAHY
LGEQIEAFGGSYILTFIAYNAGPKRVPEWIGRYGDPRGRPVDEIVDWIERIPFPETRNYV
QRVMENYEVYKARLGQPTDIERDLIGGRSAS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagctgtcctgattctgaccgccttcggctttgttgccgccgcgtggggcagc
ctcgcgtcgccgctttccggcgaaggcattccgacgcctgacgtcaagccgatcgacttc
gttcccgagacatcgatacctgcagcgcttacaaccggcgccataccccgcaatcccgcc
gtcgcgcctgtcgccagcgatctgaaaaccggcctcgacgcactttccgctaagaatccg
caactggctctatcgatccgcgacagcatgcgcgagggtacgctcgaccggcatatcctc
acctgggcgatcgccgtctccggattgaagggcgttccctcttatgaaatcgccagcgcc
gcgcagaagctcaagggatggcccggcctttccaggctgcgcgcctattccgaacgtgcg
ctctacgacgaaaaccccgccccgtcagccgtgctcgccgctttcggcgacaccgcgccg
gagacgatgcagggcgccgtcattctcgggcgggcgctgactgcgtcaggcaagcaggcg
caggcggcaaaatatatccgcaaggtctggcgcaccgaggctctcgacaaggcgagcgaa
gacaagatcctcctcgagttttccgccctgctgacgccagccgaccacaaggcgcggatg
gactatctgatgtatcgtggccgggtggcgcaggccaagcgcttcggcgacatgggcgag
gcgcagtccctctacaaggcctgggccgccgtcgacgccaaagccgccaatgccggcgcg
cttctcaatagcgtcgagccgaaatggcgtggcgatgccggcctgctgttcgcgcggatc
gaatatctgcgcaagcaggacaaatatgccgaagcggcggcgcttctggaaaagatgccg
cgcgagccgggcgaactcgtcaattccggagaatggtggaacgagcagcggatcgtcagc
cgcggcctcgtcgatcagggacaattcagaccggcctaccgcgtcgtcgcaaactccgcg
gcaaccagcccgacagatatcgtcgaggccgagttccatgccggatggtatgcgctgcgc
ggtctgcaggatccgacaacggcagaaaagcatttccgcaagattctggcgacttcgaac
ggtcccatctcggtgtcgcgcgcctggtactggctcgggcgggcagccgaggccggcgga
accggcaactccggcgaattctacggcaaggccgcgaattttcccggcaccttctatggg
cagctcgcggccgaaaggctcggacgcaagacgctcaacgtcagctatcccacgccgagc
gcagccgaccgccagagtttcgaggcgcgcgaggccgtgcaggcaatcgcccggcttgag
gcagccggccacggatggcgggccgacatcctctatctcgcgctcgccgatcagctgcaa
agtcgcggtgaactggcgatcctggcggcgcaggccgaacaatcaggcaatcatcatctg
tccctgcagatcggcaagatcgcctatggccgcggcatcgacgtcgccgcactcgccttt
cccgtcggcgtaatcccggccaatgccaatatctccggctccggcaaggcgctcgcctat
gccattgcccggcaggaaagcgcctttaacccggccgccgtttcggccgcaaatgcgcgc
ggcctgctgcagcttctgcccggcacggcccaagcggtggccaagcgccacaacatcacc
ttttcgaaggacaagctgacggccgatgccggctataatgcaacgctcggcgcgcattat
ctcggcgaacagatcgaagccttcggcggctcctacatcctcaccttcatcgcctataat
gccggcccgaagcgggtgccggaatggatcggacgctacggcgacccacgcggtcggccg
gtcgacgagatcgtcgactggatcgagcgcatccccttccctgaaacgcgcaactacgta
cagcgggtgatggagaattatgaagtctacaaggctcgcctcggccagccgacggatatc
gagcgcgacctgatcggcggacgcagcgcttcctga
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