Rhizobium etli CFN 42: RHE_CH03889
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Entry
RHE_CH03889 CDS
T00317
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase alpha subunit protein
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00020
Citrate cycle (TCA cycle)
ret00640
Propanoate metabolism
ret00660
C5-Branched dibasic acid metabolism
ret01100
Metabolic pathways
ret01110
Biosynthesis of secondary metabolites
ret01120
Microbial metabolism in diverse environments
ret01200
Carbon metabolism
Module
ret_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHE_CH03889 (sucD)
00640 Propanoate metabolism
RHE_CH03889 (sucD)
00660 C5-Branched dibasic acid metabolism
RHE_CH03889 (sucD)
Enzymes [BR:
ret01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RHE_CH03889 (sucD)
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GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABC92635
RhizoBase:
RHE_CH03889
UniProt:
Q2K3F1
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All DBs
Position
complement(4122570..4123472)
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AA seq
300 aa
AA seq
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MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF
ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR
SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT
AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM
AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVLRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctattctcgtcaataaagacaccaaggtccttgttcagggtctgaccggcaagacc
ggcaccttccacaccgaacaggcgcttgcttattacggcacccagatggtcggtggtatt
cacccgaagaagggtggcgaaacctggaccggctcgaagggcgaaagcctgccgatcttt
gcaaccgttgccgagggcaaggaaaagaccggcgccgatgcgaccgtcatctacgttccg
ccggccggtgctgccgacgcaatcatcgaggcgatcgacgccgagattccgttcatcacc
tgcatcaccgagggcattccagtcatggacatggtgcgtgtcaaggctcgcctcgaccgc
tccaagtcacgcctgcttgggcccaactgcccgggcatcctgacgccggaagaatgcaag
atcggcatcatgccgggctcgatcttccgcaagggttcagtcggcatcgtctcccgctcg
ggcacgctgacctatgaagccgtcttccagacctcgaacgaaggcctcggccagacgacg
gccgtcggcatcggcggcgacccggtcaagggcaccgagttcatcgacgtgctcgagatg
ttcctcgccgacgaagccacccagtcgatcatcatgatcggcgaaatcggcggctctgct
gaagaagacgcggctcagttcctgaaggacgaagccaagaagggccgcaagaagccgatg
gccggcttcatcgccggccgcacggcgccgaagggccgtaccatgggccatgccggtgcc
gtggtatccggcggcaagggcgacgcggaatcgaagatcgcggcgatggaatcggctggc
atcaaggtgtctccgtctccggcccgtctcggcaagacgctggttgaagtcctgaggggc
tga
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