Rhizobium esperanzae: AMJ99_CH03357
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Entry
AMJ99_CH03357 CDS
T05681
Name
(GenBank) ATP-dependent RNA helicase protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rez
Rhizobium esperanzae
Pathway
rez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMJ99_CH03357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rez03019
]
AMJ99_CH03357
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AMJ99_CH03357
Messenger RNA biogenesis [BR:
rez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMJ99_CH03357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
HEM4
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANL04875
LinkDB
All DBs
Position
3345335..3347266
Genome browser
AA seq
643 aa
AA seq
DB search
MRLSFHPSGRRVSVPLLENTKRRKKGQKRISIEAALPRSGQKRWKAFSNLQVPTSRGVLD
ARMKPDRMVRSGASRCGAPKGYTLTNFESLGVSKPIVATLFQLGIETPTPIQEQSIPLLI
SGRDLIGLAQTGTGKTAAFGLPLIEKLLADERRPDNRTTRTLILAPTRELVNQIAENLKK
FIRKSPLRINVVVGGVSINKQQLQLEKGTDILVATPGRLLDLVNRRAITLTTVRYLVLDE
ADQMLDLGFVHDLRKIAKLVPKKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAA
DKVEQYVHFVAGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLDNIGYSVASIH
GNKSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRT
ARAGRDGIAIAFCAPDEAKLLRDIERLMGIDITVASGEPPAHISAGGPRRGNGNGNNRNR
GGGQGRGEGRGDANRSEHRGSRQERRPRRDGEGSEIRAGGEERRERRPRPERPNRNEDFR
GQRRGEAAPDFGPDNDLASTSDFRPAKPQRPAHNGPNGHHASGEPSGHHRGNGRHAHGRP
ARKHGEDRGPHQAQGGEQRRDGNGGNRRGGAGSRNGGQRRERA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcagctttcacccttccggccgccgcgtgagcgtgcccctgctagaaaatacg
aaacgcaggaagaagggacaaaagcgcatttcgattgaggccgcactcccaagaagcggt
cagaagcgctggaaagctttttccaacttgcaagttcccacttcacgcggggttcttgac
gccagaatgaaaccggatcgcatggtgcgttccggcgctagtcgttgtggcgccccgaaa
ggttataccttgactaattttgaatcgcttggtgtctccaagccgatcgtcgccaccttg
ttccagctcggcatcgaaacgccgacgccgatccaggaacagtccattccactcctcata
tcaggccgcgatctgatcggccttgcccagaccggcaccggcaagaccgccgcgttcggc
ctgccgctcatcgaaaagctgctcgctgacgagcgccgccccgacaaccgtacgacgcgg
acactgatcctggcgccgactcgcgagctggtgaaccagatcgccgagaacctgaagaag
ttcatccgcaagtcgccgctgcgcatcaacgtcgtcgtcggcggtgtgtcgatcaacaag
cagcagctgcagctcgaaaagggcaccgacatccttgttgccacgccaggccgcttgctc
gacctcgtcaaccgccgcgccatcaccttgacgacagtgcgttatctcgtgctcgacgaa
gccgatcagatgctcgacctcggcttcgtgcacgacctgcgcaagatcgccaagctggtg
ccgaagaagcgccagaccatgctgttttcggccaccatgccgaaggcgatcgccgatctc
gccggcgaatatctcgtcgatcccgtcaaggtcgaagtcacgcctccgggcaaggctgcc
gacaaggtcgagcagtatgtgcatttcgtcgccggcaagaacgacaagaccgaactgctg
cgcaagtcgctgaccgaaaaccccgacggccgcgccatcgtcttcctgcgcaccaagcac
ggcgccgagaagttgatgaagcacctcgacaatatcggctattccgtcgcctcgatccac
ggcaacaagagccagggtcagcgcgagcgggcgctgaaggccttccgcgacggcagcatc
aagacgctgatcgccaccgacgtcgccgcccgcggcatcgacatcccggccgtcagtcac
gtctacaactacgacctgcccgaggtgccggacgcctatgtccatcgtatcggccgcacg
gcgcgcgccggccgcgacggtattgccatcgccttctgcgcccccgacgaagccaagctg
ctgcgtgatatcgaacgcctgatgggcatcgacatcacggtcgcaagcggcgaaccgccg
gcacatatcagcgctggcggcccgcgccgcggcaacggcaatggcaacaaccgcaatcgc
ggcggcggccagggccgcggcgaaggccgtggcgatgccaaccgttcggaacatcgcggc
agccgccaggaacgccgcccgcgccgcgacggcgaaggcagcgaaatccgtgccggcggc
gaggaacgccgtgagcgccgtccgcgtcccgagcgcccaaaccgcaacgaggacttccgc
ggtcagcgccgcggcgaagcggccccggatttcggccccgacaacgatctggcatcgacc
tccgatttccgcccggcaaagccgcagcgccctgcgcataacggccccaatggccatcat
gccagtggcgaaccgagcggccatcaccgcggcaacggccgccacgctcacggccgcccg
gcccgcaagcacggcgaagatcgcggaccgcatcaggcacagggcggcgaacagcgccgc
gacggcaatggcggcaaccgccgcggcggcgcgggctcccgcaacggtggccagcgccgc
gaacgcgcctga
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