Roseomonas fluvialis: Rmf_43740
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Entry
Rmf_43740 CDS
T08992
Name
(GenBank) hypothetical protein
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00500
Starch and sucrose metabolism
rfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Rmf_43740
Enzymes [BR:
rfl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
Rmf_43740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_48
GlgX_C
Alpha-amylase
pulA_all-beta
DUF3459
Motif
Other DBs
NCBI-ProteinID:
BDG74445
LinkDB
All DBs
Position
4562918..4566679
Genome browser
AA seq
1253 aa
AA seq
DB search
MDDGAAEPLGVHLTAEGASIAIPAPGADAVEFCLFDQAGAREVGRWRLPGRTGDVFHGML
RGVVQGARYGLRAHGPASERFDPSKLLLDPWARAIDRPFATHDTLLVPGADSSAAMPKVV
LVAPLPPAPAPPPCPGPRVIYELHVRGFTRSHPDIPDAIRGTFAGLAHPAAIAHLRRLGV
THVELMPTAAWVDEPQLAPLGLTNAWGYNPVAWLAPDPRLAPGGMAEVRAAVAALAEAGI
GTILDVVLNHSGEGDAQGPTLSLRGLGDAAWYRTDTQGRYVNDSGCGHALALDQAWPLRL
AMDAMRHWVGQAGLAGLRLDLATTLGRRANGFDPQAPLLQAMRQDPLLRDRWIIAEPWDV
GHGGYRLGAFPPGWGEWNDRFRDSIRRFWRGDVGSLGDAATRLAGSRDVFGTRPATDSIN
FVTAHDGFTLADLVSHAQKHNTANGEENRDGTNDNLSWNHGIEGASDDPDITARRKADVR
ALLATLLAARGTPMLSMGDEAGRSQLGNNNAWCQDNATTWFDWTAADEALVDFTARLVSL
RRAHPALSGTAPLTGTPDATGAPDLRWLRLDGSPMTSEDWTNPGSRSVVMVLQSGETRAL
VALHGGDDSATLTLPEGTWRLLADSADPARDTAPGKSVPLAPRSVAWFTAMPNAPRAPAA
PDRALLAELSTAAGIATQWHDIDGARHAVPEATLRAVLAALDLPAETTAQARDSLARRRA
APRSANVDPGQCHDAPAGRRFGVAAQLFALRHDVDQGIGDYTALAMLARGAAAHGAALVG
LSPPHALMPTERERASPYQPSDRRFLEPVLLDVTALPMVGDAPAVRAALDRHAAVFAALR
AGTLVDYPATWAAKRAVLDAAVAALPRDHAEFTAFRGEGGTALEDFAAFAVLAERFGPRD
WPAGHAHPDDTAMASLRASASDALRFHTALQWMCDRQLGAAAAAGPGLYRDLAVGAAPDG
AEVWSQPGAFLRGFSIGAPPDPFAADGQVWGLPVPHPHVSEATRHGGFATLLRANMRHAR
ALRLDHAMGLERLFIVPEGARANEGCYLHCDGSGMLATLARESRAAACAVVGEALGTVPE
GFADRLAAARVLAYRVLWFERDGHGFRAPADWPALAAACVSTHDLATLAGWWTGADLEER
AALGLLAPAAAQTSLDVRAREREALAAACGIAAGSFGPETAAAVHRFVAATPSRMMLVQA
EDLAGERIGVNLPGTDRERPNWRRRLPMAADRLFDGDSAPAVLAAILAQRGAG
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggatgatggtgcggcggagccactcggcgttcatctgacggccgagggcgccagcatc
gccattccggcgcctggtgccgacgccgtggaattctgcctgttcgaccaggccggtgcg
cgcgaggtcggccgctggcgcctgccgggacgcaccggcgatgtctttcacggcatgctg
cgcggcgtcgtgcagggcgcccgctacgggctgcgtgcgcacggccccgcgtcggagcgt
ttcgatccatccaagctgctgctcgacccctgggcgcgggcgatcgatcgtcccttcgcg
acgcacgacacgctcctggtgcccggcgcggacagctcagcggccatgcccaaagtggtg
ctcgtggcgcccttgccgccggcgccggcgccgccgccctgccccggcccgcgtgtgatc
tacgaactgcatgtgcgcggcttcacgcgcagccatcccgacatacccgacgcaatccgc
ggcaccttcgcgggccttgcgcatccggccgccatcgcacatttgcggcgccttggcgtt
acccatgttgaactcatgcccaccgccgcctgggtcgatgaaccgcagctggcgccgctc
ggactgaccaacgcctggggctacaatccggtcgcgtggctcgcgccggacccgcggctc
gcgcccggtggcatggcggaagtgcgcgccgccgtcgccgcgctggccgaggccgggatc
ggcaccatcttggatgtcgtgctgaaccattcgggcgagggcgatgcacaggggcccacg
ctatccttgcgtggtctcggcgacgccgcctggtatcgcaccgatacgcagggccgctac
gtgaacgacagcggctgtggccatgcattggcgctcgaccaggcctggccgctgcgcctc
gcgatggatgcgatgcgccactgggtcggccaagccgggctggccgggctgcggctcgac
ctcgcgaccacgctcggacgccgcgcgaacggcttcgacccgcaggccccattgctgcag
gcgatgcgccaggacccgttgctgcgcgaccgctggatcatcgccgagccgtgggatgtc
ggccatggcgggtatcggctgggcgccttcccgccaggctggggcgagtggaacgaccgc
ttccgcgacagcattcgccgcttctggcgcggcgatgtcggaagcctcggcgatgcggcg
acgcgcttggccgggtcgcgcgacgtcttcggcacgcgccccgcgaccgacagcatcaac
ttcgtcacggcccatgacggcttcacgctggccgacctggtcagccatgcgcagaagcac
aacacggcgaatggcgaggagaaccgcgacggcaccaacgacaacctctcctggaaccac
ggcatcgagggcgcgagcgacgatcccgacatcacggcgcgccgcaaggcggatgtccgc
gcgcttctggcgacgctgctcgccgcgcgcggcacgccgatgctctcgatgggcgacgag
gccgggcgcagccagctgggcaacaacaacgcctggtgccaggacaatgcgacgacctgg
ttcgactggaccgcggccgacgaggcgctggtcgacttcaccgcgcggctggtctcgctg
cggcgcgcacatcccgcgctgtcgggcacggcaccgctgaccggcacgcccgatgcgacc
ggcgcgcccgacctgcgttggctgcgcctggacggcagtccgatgacctcggaggactgg
accaaccccggatcgcgcagcgtggtcatggtgctgcagtccggcgagacgcgggcgctg
gtggccctgcacggcggcgacgacagcgcgacgctgacgctgccggaaggcacctggcgc
ctgcttgccgacagcgccgatcccgcgcgcgacaccgccccaggcaagtctgtcccgctg
gcaccgcgctccgtcgcgtggttcaccgcgatgccgaacgcgccgcgcgcgcccgccgcg
ccggatcgagcgttgctggccgaactgtcgaccgctgcgggtatcgcgacgcagtggcac
gatatcgatggcgcacgtcatgcggttcccgaggcgacattgcgcgcggtgctcgccgcg
cttgatctgccggcagagaccaccgcccaggcgcgcgacagcctggcgcgacgtcgcgcg
gcgccgcggagcgcaaacgtcgatcccgggcagtgccacgacgctccggcgggtcgacgc
ttcggcgtcgccgcgcagctgtttgcgctgcgccacgacgtcgaccagggcatcggcgac
tacaccgcgctcgcgatgctggcgcgcggcgcggcggcacacggcgctgcactggtcggc
cttagcccgccgcatgccctgatgccgacggagcgggaacgcgccagcccctaccagccc
tcggatcgccgcttcctcgaacccgtgctgctcgatgtgacggcgctgcccatggtcggc
gacgcaccggccgtccgggccgcgctggaccgccacgcagcggttttcgccgcgctgcgc
gccggtacgctggtcgactacccggccacatgggctgccaagcgcgccgtgctcgatgcc
gcggtcgcagccttgccgcgcgaccatgccgaattcacagcgttccgcggggagggcggc
accgcgctcgaggatttcgcagccttcgccgtcctggccgagcgcttcggaccgcgcgac
tggccggccggccatgcgcatcccgacgacaccgcgatggcgagtctgcgggcgagtgct
tcggatgcgctgcgctttcacacggcgctgcaatggatgtgcgaccgtcagcttggtgct
gccgccgcggcggggccggggctataccgcgacctcgcggtcggtgccgcgcctgacggc
gccgaggtgtggtcccaacccggcgcgttcctgcgcggtttctcgatcggcgccccgccc
gaccccttcgcggccgatgggcaggtgtggggcctgccggtaccgcatccgcacgtttcg
gaggccacgcggcatggcggcttcgccacgctgctgcgcgccaacatgcgccacgcacgc
gcgctgcggctcgaccacgcgatgggtctcgagcggctgttcatcgtgcccgagggcgca
cgcgccaacgagggctgctacctgcattgcgacggatcggggatgcttgcgacgctggcg
cgggaaagccgcgccgcggcgtgcgctgtggttggcgaggcgctcggcaccgtgccggag
ggtttcgcggatcggctcgcggcagcgcgtgtgctggcgtatcgcgtgctctggttcgag
cgcgacggccatggcttccgcgctcccgccgactggcccgcgctggccgcggcctgcgtg
tccacccacgacctcgcaacgctcgccggctggtggaccggcgccgatctcgaagaacgc
gcggcgctgggattgttggcgccggccgcagcgcagacatccctcgacgtgcgcgcgcgg
gagcgcgaggcgctcgccgcggcctgcggcatcgcagccggcagcttcggcccggaaacg
gcagcagccgtccaccgctttgtcgccgcgacgccgagccgcatgatgctcgtgcaggcc
gaggaccttgccggcgagcggatcggtgtaaacctgcccggcaccgaccgcgaacgcccg
aactggcgccggcgcctgccgatggcggcggatcggctgttcgacggcgacagcgcgcct
gccgtgcttgccgcgatcctggcgcagcgcggcgctggctga
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