Rhinolophus ferrumequinum (greater horseshoe bat): 117012299
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Entry
117012299 CDS
T07722
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq02010
ABC transporters
rfq04976
Bile secretion
rfq05206
MicroRNAs in cancer
rfq05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117012299 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
117012299 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117012299 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
117012299 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfq02000
]
117012299 (ABCB1)
04147 Exosome [BR:
rfq04147
]
117012299 (ABCB1)
04090 CD molecules [BR:
rfq04090
]
117012299 (ABCB1)
Enzymes [BR:
rfq01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117012299 (ABCB1)
Transporters [BR:
rfq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117012299 (ABCB1)
Exosome [BR:
rfq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117012299 (ABCB1)
CD molecules [BR:
rfq04090
]
Proteins
117012299 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
RsgA_GTPase
Rad17
AAA
AAA_5
AAA_14
AAA_7
AAA_29
G-alpha
AAA_28
AAA_30
SbcC_Walker_B
AAA_15
DUF815
nSTAND1
PRK
APS_kinase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
117012299
NCBI-ProteinID:
XP_032944292
Ensembl:
ENSRFEG00010019441
LinkDB
All DBs
Position
20:37535985..37619939
Genome browser
AA seq
1279 aa
AA seq
DB search
MDLEGSQNGRAGKNFLKVGKKSKKDEKKEKKPTVSAFAMFRYSNWLDRLYMLLGSLAAMI
HGAGLPLTMLVFGDMTDAFANAGMSLNLTSTNMTNASLSNITYDFNLEEEMTTYAYYYTG
IGAGVLVAAYIQVSFWCLAAGRQILKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDVS
KINEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAMWAKVLSSFT
DKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISMG
AAFLLIYASYALAFWYGTSLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPSIETFANARG
AAYEIFKIIDNKPHIDSYSKHGHKPENIKGNLEFTNVHFSYPSRKEVQILTGLNLTVQSG
QTVALVGNSGCGKSTTVQLIQRLYDPTEGMVSIDGQDIRTINVRYLREIIGVVSQEPVLF
ATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPDKFDTLVGERGAQLSGGQKQRIA
IARALVRNPKILLLDEATSALDTESEAVVQAALDKARKGRTTIVIAHRLSTVRNADVIAG
FDNGVIVEKGNHDELMKEKGIYFKLVTMQTRGNEIEFENVTGETKGEIDALEMSPKDSGS
SLIRRRSTCKSIPATPGQERKLSTKEALDENVPPVSFRRILKMNATEWPYFVVGVFCAII
NGGLQPAFSVIFSKIIGVFTRDEDPETKRQNSNIFSLLFLMIGIISFITFFLQGYTFGKA
GEILTKRLRYMVFRSILRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGARLAVIAQNI
ANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGLIEVKMLSGQALKDKQELEGAGKIATEA
IENFRTVVSLTQEHKFEYMYAQSLQVPYRNSLRKAHIFGITFSITQAMMYFSYAGCFRFG
AYLVANKFMDFEAVLLVFSAVVFGAMAVGQVSSFAPDYAKAKVSASHIIMIIEKVPVIDS
YSTEGLKLNTLEGNVTFNEVMFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVV
QLLERFYDPLAGKVLIDNKEIKHLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVV
SQEEIVRAAQEANIHHFIETLPDKYKTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLD
EATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVQECGTHQQL
LAQKGVYFSMVSVQAGAKR
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaaggaagccagaatggaagagcagggaagaacttcttgaaagtgggcaaa
aaaagtaaaaaagatgagaagaaagaaaagaaaccaactgtcagtgcatttgcaatgttt
cgctattcgaattggcttgataggttgtatatgttgctggggtctctggccgccatgatc
catggagctggactccccctcacgatgctggtttttggagacatgacggatgcctttgca
aatgcaggaatgtcactaaacttaacttctacaaacatgactaatgcaagtctgagcaac
attacatatgacttcaacctggaggaggagatgaccacgtatgcctattattacactgga
attggtgctggtgtgcttgttgctgcttacattcaggtttcattctggtgtctggcagct
ggaagacaaatacttaaaattagaaaacagttttttcatgctataatgcggcaggagata
ggctggtttgacgtgcatgatgttggggaacttaacactcggctcacagatgatgtctcc
aaaattaatgaaggaattggtgacaaaattggaatgttctttcagtcaatggcaacgttt
ttcactggctttatagtaggatttacacgtggttggaagctaacccttgtgattttggcc
atcagtcctgttcttggactgtcagctgccatgtgggcaaaggttctatcttcatttact
gataaagaactcttagcatatgcaaaagctggagcagtagctgaagaggtcttagcagcg
attcgaactgtgattgcatttggaggacaaaagaaagaacttgaaaggtacaacaaaaat
ttagaagaagctaaaagaattggaataaagaaagctattacagccaacatttctatgggt
gctgctttcctactgatctatgcatcatatgctctggcattttggtatgggacctccttg
gtcctctcaggagaatattctattggacaagtactcactgtctttttttctgtattaatt
ggggcttttagtgttggacaagcatctccaagcattgaaacgtttgcaaatgcaagagga
gcagcttacgaaatcttcaagataattgataataagccacacattgacagctattcgaag
catgggcacaaaccagaaaatattaagggaaatttggaattcacaaatgttcacttcagt
tacccatctcgaaaagaagttcagatcttgacgggtctcaacctgacggttcagagcggg
cagacggtggctctggttgggaacagcggctgcgggaaaagcacaacagtccagctcatt
cagaggctctatgaccctaccgagggcatggtcagtattgatggacaggacatccgaacc
ataaatgtcaggtatctgcgggaaattatcggtgtggtaagtcaggaacctgtattgttt
gccaccacaatagccgaaaacattcggtacggccgtgaaaatgtcaccatggatgagatt
gagaaagctgtgaaggaagccaacgcctatgactttatcatgaaactgcctgataaattt
gacaccctggttggagagagaggggcccagctgagtggtggacagaaacagagaatcgcc
atcgctcgggccctggttcgcaatcccaagatccttctgctggatgaggccacatcagcc
ttggacactgaaagtgaagcagtggtccaggcagctctggataaggccagaaaaggccgg
accaccattgtgatagcacatcggttgtctacagttcgtaatgctgatgtcatcgctggt
tttgataatggagttattgtggagaaaggaaatcatgatgaactcatgaaagaaaaaggc
atttacttcaaacttgtcacaatgcagacaagaggaaatgaaattgagttcgaaaatgta
accggtgaaaccaaaggtgaaatagatgccttggaaatgtctccaaaggattcaggatcc
agtttaataagaagaagatcaacttgcaagagtatccctgcaacaccaggccaagagaga
aagcttagtacaaaagaggccttggatgaaaatgtacctccagttagctttcggaggatt
ttgaaaatgaatgcaactgaatggccttattttgtggttggcgtattttgtgccattata
aatggaggcctgcaaccagcattttcagtaatattttcaaagatcataggggtttttacc
agagatgaagatcctgaaacaaaacgacagaacagtaacatattttcactgttgtttcta
atgattggaattatttcttttattacatttttccttcagggctacacatttggcaaagca
ggagagatcctcaccaagcggcttcgatacatggttttcagatccattctgagacaggat
gtgagctggttcgatgaccctaaaaacaccaccggagcactgacgaccaggcttgccaat
gacgctgctcaagttaagggggctacaggtgccaggcttgctgtcattgcccagaatata
gcaaatcttgggacaggcattattatatccttaatttatggctggcaattaacactttta
ctcctagcaattgtacccatcattgcaatagcaggacttattgaagtgaaaatgttgtct
ggacaagcactaaaagataagcaagagctagaaggtgctgggaagatcgctaccgaagca
attgaaaacttccgaaccgttgtttctttgactcaggagcacaagtttgaatatatgtat
gcacaaagtttgcaggtaccatacagaaactctttgaggaaagcacacatctttggaatc
acattttccatcacccaggcaatgatgtatttttcctatgctggttgtttccggtttggt
gcctacttggtggcaaacaagttcatggattttgaggctgttctcctggtgttttcagct
gttgtctttggtgccatggcagtggggcaggtcagttcctttgctcctgactatgccaaa
gccaaagtgtcagcatcacacatcatcatgatcattgaaaaagtccctgtgattgacagc
tatagcacagaaggcctgaagctgaatacgttggaaggaaatgtgacatttaatgaagtg
atgttcaactaccccactcgaccagacatcccagtgcttcaggggctgagcctggaggtg
aagaagggccagacgctggccctggtgggctccagcggctgtgggaagagcacggtggtc
cagctccttgagcggttttatgatcctttggccggaaaagtgctcattgacaacaaagaa
ataaagcacctgaatgtccagtggctccgagcccagctgggcatcgtgtcccaggagccc
atcctgtttgactgcagcattgcggagaacattgcctacggagacaacagccgggtcgtg
tcacaggaagagattgtgcgggccgcccaggaggccaacatacaccacttcattgagaca
ttgcctgacaaatataagaccagagtgggagacaaaggaactcagctctctggtggccag
aaacagcgcattgcaatagcacgtgcccttgttagacagcctcatattctgcttttggat
gaagctacatcggctctggatacagaaagtgaaaaggttgtccaagaagccctggacaaa
gcccgagaaggccgcacctgcattgtgatcgcgcaccgcctgtccaccatccagaacgca
gacttaatagtggtgtttcagaacggcagagtccaggagtgcggcacccaccaacagctg
ctggcacagaaaggcgtctacttttccatggtcagcgtccaggctggagccaagcgctag
DBGET
integrated database retrieval system
