Rhinolophus ferrumequinum (greater horseshoe bat): 117013944
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Entry
117013944 CDS
T07722
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rfq04515
]
117013944 (DSCAM)
Cell adhesion molecules [BR:
rfq04515
]
Immunoglobulin superfamily
DSCAM family
117013944 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
Sp38
C1-set
V-set_CD47
fn3_2
ChitinaseA_N
Adeno_E3_CR1
DUF6377
Motif
Other DBs
NCBI-GeneID:
117013944
NCBI-ProteinID:
XP_032947453
Ensembl:
ENSRFEG00010003886
LinkDB
All DBs
Position
2:complement(104565059..105205217)
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AA seq
2019 aa
AA seq
DB search
MWILALSLFQSFANVFSDDLHSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPVSLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYIAVISWEKDTVSLISGSRFLITSTGA
LYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQ
RVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENTRPSDSGSYVCEVSNRYG
TAKVIGHLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGSEDQELSWYRNGEILNPGKNV
RITGMNHENLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSP
AEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNEAAAMEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT
IVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMVTSYPNTTLATQGQKKELSCMAHGEKPIIVRWEKEDRIINPEMARYLVSTK
EVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKART
ITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQKTKDVSPQLNSATIIDIHPSSTYSIRM
YAKNRIGKSEPSNELSITADEAAPDGPPQDVHLEPISSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSAGGNFQFNIISIDTTGDSEIYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII
TTTLEDVPSYPPENVQAIATSPESISISWSTLPKEALNGILQGFRVIYWANLMDGELGEI
KNVTTMQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIALPCKAVGDPSPAVKWM
KDSNGTPSLVTIDGRRSVFSNGSFVIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLEN
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQIRVCNSAGCAEKQ
AHFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKMLVTISCILVGVLLLFALLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNNTGKGEDPTTR
RNAKAGPTARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAVGSMDKESDSYSVSPSQD
TDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNE
YTDSLTSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLIHLPPYLRMDFLLNR
SGPGTSRDLSLGQACLEPQKSRTLKRPTVLEPIPMEASSSTASNREGQQWQQGAVATLPQ
REGAELGQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactggccctctccttgttccagagcttcgcgaatgttttcagcgacgacctt
cactccagcctctactttgtcaatgcatctctgcaagaggtagtgtttgcgagcaccacg
gggaccctggtgccctgccctgctgcaggcgtccctcctgtgtctctcagatggtaccta
gcgacgggcgaggagatctacgatgtccctgggatccgtcacgtccaccccaacggcact
ctccaaattttccccttccctccttcaagctttagtaccttaatccatgataatacttac
tattgcacagctgaaaacccttcagggaaaattagaagtcaggatgtccacatcaaggct
gttttacgggagccctatacagtccgcgtggaggaccagaaaaccatgagaggcaatgtc
gcggtcttcaagtgcattatcccctcctcggtggaggcgtacatcgccgtcatctcatgg
gagaaagacactgtttcactcatctcaggatctagatttctcatcacatccacgggagcc
ttgtatattaaagatgtacagaatgaagatggattgtataactaccgctgtatcacgcga
cacagatacactggggagacgaggcagagcaacagtgccagactttttgtatcagatcca
gcgaactcagccccatccatactggatgggttcgatcatcgcaaagccatggcaggacag
cgtgtggagctgccttgcaaagcgcttgggcaccctgagccagattaccgctggctaaaa
gacaacatgcccctggaactttctggaaggttccagaagactgtgacggggctgctcatt
gaaaacactcgtccctcagactcaggcagctatgtgtgtgaagtgtccaacagatatgga
actgctaaggtgataggccacctgtacgtgaaacagccactgaaagctaccatcagcccc
aggaaagttaaaagcagcgtgggtagccaggtttccttgtcctgcagcgtcacaggaagt
gaggaccaggaactctcctggtaccgaaacggtgaaatcctcaaccctggaaaaaatgtg
aggatcacagggatgaaccacgaaaaccttataatggatcacatggtcaaaagtgacggg
ggcgcgtaccagtgctttgtgcgcaaggataagctgtccgctcaagactatgtgcaggtg
gtcctcgaagatggaactcccaaaattatttctgcctttagtgaaaaggtggtgagtcca
gcagaaccagtttccctcatgtgcaatgtgaagggaactccattgcccacaatcacgtgg
accctggacgacgaccccattctcaagggtggcagtcaccgcatcagccagatgatcaca
tcagaggggaacgtggtcagctacctgaacatctccagctctcaggtccgggatgggggc
gtctaccgctgcactgccaataactcggccggagtcgtcttgtaccaggctcgaataaac
gtaagagggcctgcaagtattcgaccaatgaaaaatatcacagcaatagcaggacgggac
acatacattcactgtcgtgtgattggctatccatattactccatcaaatggtataagaat
tctaacctgcttccttttaaccatcgccaagtggcgtttgagaacaatggaactctaaaa
ctctcagatgtgcaaaaggaagttgacgagggagagtacacgtgcaacgttctggttcaa
ccacaactctccaccagccagagtgtccatgtgacagtcaaagttccacctttcatccaa
ccttttgagtttccaaggttctccattggacagcgggttttcatcccatgtgttgtggtc
tcaggggacttacccatcacgatcacctggcagaaggatggccgaccaatcccagcaagc
cttggggtgaccattgacaacattgacttcaccagctccttaaggatttccaacctttct
ctgatgcacaatggaaactacacctgcatagcccggaacgaggcggccgccatggagcac
caaagccagctaatcgtgagagttcctcccaagtttgtggttcagccacgggaccaggat
ggcatttatggcaaggctgtcatcctcaattgctctgctgagggatatcctgtccccacc
atagtgtggaaattctctaaaggtgctggggttccccagttccaacccattgccctgaat
ggccgaattcaggtcctcagcaacgggtctttgttgatcaaacacgtggtggaagaagac
agcggctactacctctgcaaggtcagcaacgatgtgggcgcggacgtcagcaagtccatg
tacctcacagtcaaaattcctgcgatggtgacgtcctatccaaatactaccctggccact
caggggcaaaagaaggaactgagttgcatggcccacggcgagaaacctatcatcgtccgc
tgggagaaagaggaccggatcattaaccccgagatggcccgttaccttgtgtccaccaag
gaggtgggagaggaggtgatttctacactgcagattttgcccacggtgagagaagattct
ggcttcttctcctgtcacgctattaattcttatggggaggaccgtggaataattcagctc
acagtgcaagagcccccggacccaccagaaattgagatcaaggacgtcaaagcacgcaca
atcaccctcagatggaccatggggttcgacgggaatagccccatcaccggctacgatatt
gaatgcaaaaataaatcagactcctgggattctgctcagaaaaccaaagatgtctccccc
cagctgaactcggccaccatcattgacatccacccttcctccacctacagcatccgcatg
tatgccaagaaccggatcggcaagagcgagcccagcaacgagctgtccatcaccgcggac
gaggcagctcctgacggcccacctcaggacgttcacctggagcccatatcatctcagagc
atcagggtcacctggaaggcccccaagaagcatttgcagaatgggattatccgaggctac
caaataggttaccgcgagtacagcgctgggggcaacttccagttcaacattatcagtatt
gacaccactggggacagtgagatttacaccctggacaacctaaataagttcacccagtac
ggcctggtggtgcaggcctgcaaccgggccgggacgggaccttcttctcaggaaatcatc
accaccaccctcgaggatgtgcccagttacccccctgaaaatgtccaagccatagcaaca
tcaccagaaagcatatcaatatcctggtccacacttcccaaggaagccttgaatggaatt
ctccaggggttcagagtcatttactgggccaacctcatggatggagagttgggtgagatt
aaaaacgtcaccacgatgcagccttctctggagctggacggactagaaaaatacaccaac
tacagcatccaggtgctggcgttcacgcgcgcgggtgacggtgtcagaagtgagcagatc
tttacccggaccaaagaggatgttccaggtcctcccgcgggcgtcaaggcagctgcggcc
tcagcctccatggtctttgtgtcctggcttccccctctcaagctgaacggcatcatccga
aagtacactgtgttctgctcccacccttaccccacagtgatcagcgagtttgaagcctct
cctgactcattttcctacagaatccctaacctgagccggaatcgtcagtacagtgtctgg
gtggtggccgtgacttcagctgggagaggcaacagcagtgaaatcatcacggtggagcca
ttagctaaagctcccgcacgaatccttaccttcagtggtacagtgactactccatggatg
aaagacatcgccttgccttgtaaagctgttggggacccttctcctgcagtaaaatggatg
aaagacagtaacgggacacccagcctggtaacgattgatgggcgaaggagtgtcttcagc
aatgggagctttgtcatccgaacggtgaaggcagaagattccggctactacagctgcatt
gccaataacaactgggggtccgatgaaatcattttaaatttacaagtgcaagtcccgcca
gaccagcctcggctcacagtatccaaaaccacgtcttcttccattaccctctcctggctc
cctggagataacgggggcagttctatcagaggctacatattgcaatactcggaggataac
agtgagcagtggggaagtttcccaatcagccccagcgagcgttcttaccgcctagaaaat
ctgaaatgtgggacttggtataagttcactcttactgcccaaaatggagtggggccgggg
cgcataagtgaaatcatagaagcgaaaacattagggaaagagccccagttctccaaggag
caggaactctttgccagcatcaacaccacgcgcgtgaggctgaacctcatcggctggaat
gacggtggctgtcccatcacctccttcacgcttgagtacaggccctttgggaccacagtg
tggaccacggctcagcggacatctctctccaagtcgtacattctgtatgacctgcaggaa
gccacctggtatgagctgcagatccgggtgtgcaacagcgccggctgtgcagagaagcag
gcccacttcgccacgctcaactacgacggcagtacaatccctccgctcattaagtccgtt
gtccaaagtgaagaagggctgacaaccaacgaggggctcaagatgctggtgaccatctcc
tgcatcttggtgggtgtcctgctgctgtttgcactcttgctggtggtgcggagaaggagg
cgggagcagaggctgaagaggctgagagatgcaaagagtttagctgaaatgctcatgagt
aagaatacccggacttcagacaccttgagcaagcaacagcagaccctgagaatgcacatt
gacatacccagggctcagcttttgatagaagaaagggacacgatggagaccattgacgac
cgctccacggtattgctgacggatgctgactttggagaagccgcgaaacagaagtcgctg
acagtgacgcacaccgtccattaccagtcagtgtcgcaggccaccgggcccttagtggat
gtttcagacgctcggccaggaacgaacaacacaggaaaaggagaagatcctaccaccagg
aggaacgcaaaggctgggcccacagcaagaaaccggtacgccagccagtggaccctcaac
aggccccaccccaccatttcagcacacacgcttaccacagactggaggctgccgacgccc
agggctgtgggatcaatggacaaggagagtgacagttacagcgtcagcccctcccaggac
acagatcgagcgcgaagcagcatggtctccacagaaagtgcctcctccacttacgaagaa
ctggccagggcctacgagcacgccaagatggaagaacaactgaggcacgccaagtttacc
atcaccgagtgcttcatctcagacacatcatctgaacagttgacggcagggacaaatgag
tacacggacagtctgacctccagcaccccttcagaatcggggatctgcaggttcactgca
tctccccccaaacctcaggatggaggacgagtgatgaacatggcggttccaaaggcacat
cggccaggtgacctcatacatttgcctccataccttagaatggacttcttgttaaaccga
agtggcccaggcaccagcagggacctgagtttagggcaagcgtgcttggagcctcagaaa
agccggaccctgaagcgccccacggtcctcgagcccatccccatggaggcgtcctcctcc
acagcatccaacagagaggggcagcagtggcagcagggggccgtggccacattacctcag
cgagaaggggcagagctgggacaggcagcgaaaatgagcagctcccaagagtcgctgctg
gactcccggggccatctgaagggaaacaatccgtacgcaaaatcgtacaccctggtataa
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