Rhinolophus ferrumequinum (greater horseshoe bat): 117017499
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Entry
117017499 CDS
T07722
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfq03009
]
117017499 (DDX55)
Enzymes [BR:
rfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117017499 (DDX55)
Ribosome biogenesis [BR:
rfq03009
]
Eukaryotic type
Pre-60S particles
Helicases
117017499 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
Motif
Other DBs
NCBI-GeneID:
117017499
NCBI-ProteinID:
XP_032953674
Ensembl:
ENSRFEG00010020703
LinkDB
All DBs
Position
25:complement(4308054..4323388)
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AA seq
599 aa
AA seq
DB search
MEHVTEGSWESLPVSLHPRVLGALRELGFLYMTPVQSATIPLFLKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGG
RNPGEDVARFKEQGGNIVVATPGRLEDMFRRKAEGLDLVSCVRALDVLVLDEADRLLDMG
FEASINTILELLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKTDEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVKVMCIH
GKMKYKRNKIFMDFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEESYITFLAINQKCPLQEMKLQKHTVDLLPKLKSMALADRAVFEK
GMKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLKMPKMPELRGKQFPDFVPVDIN
TDTIPFKDKIREKQRQKLLQQQRKEKTENEGRKKFIKTKAWSKQKAKKEKKKKMSDKRKR
EEGSDIEDEDMEELLNDTRLLKRFKKGKITEEEFEKGLLTSGKRSVKTDLGLSDLGDDC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtctctgccggtgtcgctgcacccccgggtg
ctgggtgcgctgcgggagctgggtttcctgtacatgacgccggtgcagtctgcaaccatc
cctctgttcctgaaaaacaaagatgttgctgcagaagcggtcacgggtagtgggaagact
ctcgcttttgtcatccccatcctggaaattcttctgaggagggaagagaagttaaaaaag
aatcaggttggagccataatcatcacacccactcgagagctggctattcaaatagatgag
gtcctgtctcatttcacgaagccctttccacagttcagccagattctctggattggaggc
aggaatcctggagaagatgttgcgaggtttaaggaacaaggtgggaatatcgtcgtggcg
actccaggccgcttggaggacatgttccggaggaaggcggagggcttggacctggtcagc
tgtgtgagggccctggatgtcctggtgttggacgaagcagacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagcttttgccaaagcagaggagaacaggcctt
ttctccgccacgcagacacaggaagtggagaacctggtgagagctggcctccggaaccct
gttcggatctcggtgaaggagaagggggtggctgctagcagcacccagaaaaccccgtcc
cgcctggagaactactacatggtatgtaagaccgatgagaaatttaatcagctggtacat
ttccttcgaaatcataagcaggaaaagcacctggtcttcttcagcacctgtgcctgcgtg
gaatactacggcaaggccctggaggcgctggtgaagggcgtgaaggtcatgtgcattcat
ggcaagatgaagtacaagcgcaacaagatcttcatggacttccgcaaactgcagagcggg
attttagtgtgcactgatgtgatggcccgaggaatagatattcccgaagtaaactgggtt
ttgcagtacgaccctcccagcaatgcaagtgccttcgtgcaccgctgtggccgcacggcc
cgcatcggccatggcggcagtgcgctcgtgttcctccttcccatggaagagtcatacatc
accttcctggcaattaaccaaaaatgccccctgcaggagatgaaactccagaaacacaca
gtagacctccttccaaagctcaagtccatggccctggccgacagagctgtgttcgaaaag
ggcatgaaagctttcgtgtcgttcgtccaggcttatgcgaagcacgaatgcagcctcatc
ttcagattaaaggaccttgactttgctggtctcgctcgaggctttgccctgctgaaaatg
cccaagatgccagaactgagaggaaagcagtttccagattttgtgcctgtggacattaac
acggacaccattccatttaaagataaaattagagaaaagcagaggcagaaactactgcag
caacaaaggaaagagaaaaccgagaatgaagggagaaaaaaattcataaaaacgaaagct
tggtcaaagcagaaggccaaaaaggaaaagaagaagaaaatgagcgataaaaggaagagg
gaagagggttctgatatcgaagacgaggacatggaagaacttcttaatgacacaaggctt
ttgaaaaggtttaaaaaaggcaaaatcactgaagaagaatttgagaaggggttgctgaca
agtggcaaaaggtcagtgaagacagatcttgggctgtcagatctgggagacgactgctga
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