Rhinolophus ferrumequinum (greater horseshoe bat): 117021782
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Entry
117021782 CDS
T07722
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03013
Nucleocytoplasmic transport
rfq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117021782 (UPF3A)
03015 mRNA surveillance pathway
117021782 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117021782 (UPF3A)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117021782 (UPF3A)
mRNA cycle factors
P-body specific factors
117021782 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
117021782
NCBI-ProteinID:
XP_032961035
Ensembl:
ENSRFEG00010012600
LinkDB
All DBs
Position
4:56485230..56503597
Genome browser
AA seq
483 aa
AA seq
DB search
MRSERECAGGPGAAVAARGQSWREKPSAAEVQFRRESPRREPASPLALSSSCGSSTGKPR
EKRTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTADLSLYPHLYSRAYINFRNP
DDILLFRDRFDGYIFIDNKGLEYPAVVELAPFQKIAKRKLKKKDAKTGSIEDDLEYKKFL
ETYCVEEEKTSANPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRR
RELEKKRLREEEKRKRREEEKCKRKEADKQKKTAEKEVRIKLLKKPEKGEEAATEKPKER
GEEIDTGAGQREACVSCAVVKSRPWESRLEERREKSQNDSDKEQKDMERKLREKELETQR
YYVDDSRKLRGHYESDKLSRRNEEPKWGKGFTPDRGKTGNQDSGIPVEAAERPGREQKSE
DGLAPKKERVGNKDRPALQLYQPGACMRARERAGRSSEEGHDGRRAAAEDSTGAGAKKSE
EAE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaaagggagtgtgccggaggccccggggcggccgttgctgcgcggggccag
agctggagggagaagccgtcggctgcggaagttcagttccgccgagagtcgccgcggcga
gagccagcatcgccgctggctttgtcctccagctgtgggagcagcacaggcaaacctcgc
gagaagaggacagtcctgagcaaggtggtgatccggcgccttcctcccagcctcaccaaa
gagcagctggaagagcagctacacccgctgcctgcacacgattactttgagttctttact
gcagatctcagtctttatcctcatctctactcaagagcatacattaattttagaaatcct
gatgacatccttctttttagagatcgttttgatggatatatcttcattgacaataaaggc
ctagaataccctgcagtggtagagttggctccattccagaagatagccaaaaggaagcta
aagaaaaaagatgccaaaacaggaagcattgaagatgatctagaatataagaagttttta
gaaacttactgtgtggaggaagagaaaactagtgccaatcccgaaactcttctgggagac
atagaggcaaagacaagagaacttattgctagaagaaccacacctcttttggaatatatt
aaaaatagaaaattagaaaagcagagaattcgagaagagaagcgagaagagcgaaggagg
agggagttggaaaagaaacgtttacgggaagaagaaaaaagaaagagaagagaagaagaa
aaatgtaagagaaaagaagcagacaaacaaaagaaaactgctgagaaagaagtaaggatt
aagcttcttaagaaaccagaaaaaggagaggaagcagccactgagaagccaaaagaacga
ggagaggaaattgacactggagctggacaacgggaagcctgtgtgagctgtgccgtcgtg
aagtccaggccctgggagagcaggctggaggagcgcagggaaaagtcacaaaatgacagt
gataaagagcaaaaggatatggagagaaaattgcgagaaaaagaacttgaaacacaaaga
tactacgtggatgacagcagaaagcttagaggtcactatgagtctgacaagctttcaaga
agaaatgaagagccgaaatgggggaaaggattcacccccgacagagggaagacagggaac
caggacagtggtatccctgtggaagcagcagagagaccagggagagagcagaagagtgaa
gatggcctggcacccaaaaaggagcgcgtgggaaacaaggaccggccggccttgcagcta
taccagccaggagcttgcatgagagcacgtgaacgagctggaagatcatctgaggagggc
catgatgggaggagggctgccgcagaagattcaacaggggctggtgccaagaagagtgaa
gaggccgagtga
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integrated database retrieval system
