Rhinolophus ferrumequinum (greater horseshoe bat): 117024741
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Entry
117024741 CDS
T07722
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfq03016
]
117024741
Enzymes [BR:
rfq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
117024741
Transfer RNA biogenesis [BR:
rfq03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117024741
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
117024741
NCBI-ProteinID:
XP_032966108
Ensembl:
ENSRFEG00010015314
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All DBs
Position
7:complement(98891793..99101838)
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AA seq
735 aa
AA seq
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MAPSLDTWDFSPLISLWINRFYIYLAFAFGITLWICFQIVIRKQSFIFKDQNSQDKSVPK
ATRDLMTNGSVSLEKKEVFVSGVKIFYGSQTGTAKGFAAALAEAISSLDLPVAVIDLKEY
DPDDHLLEEVTSKNVCAFLVATYTDGRPTENAEWFCKWLEEASNDFRFGKSYLKGMRYAV
FGLGNSAYASHFNKVGKNVDKWLWMLGAQRVMTRGEGDCHVVRSKHGSIEDDFRAWKAKF
ILQLQVLRKGEKKPCDGNCKKGKCESRQPGSEEVEPGSPARDRLQQRDHAQEGPFESASV
DESDPEEQPSVPSVVDVEDLGTIVSRVRKEKRAKVQQEEKAGLFGNEVTNEASERRAMIT
PALREALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACA
NKCVFCWRHHTNPVGTEWRWKMDQPEMILKEAIENHQNMIKQFKGVPGVREQRFTEGMTV
KHCALSLVGEPIMYPEINRFLKLLHESKISSFLVTNAQFPVEIRKLMPVTQLYVSVDAST
EGSLKKIDRPLFKDFWQRFRDSLKALAAKQQRTVYRLTLVKAWNVDELQAYAELVCLGSP
DFIEVKGVTYCGESSASSLTMANVPWYEEVVRFVHELVGLIPDYEIACEHEHSNCLLIAH
KKFKVDREWWTWIDYNRFQELIQEYEDSSGSKTFSAKDYMAKTPHWALFGASERGFDPKD
IRYQRKNKSKDISGC
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctccttctttggatacatgggacttctcacctttaatatcattatggataaacagg
ttttacatatatttggcctttgcctttggcattaccctttggatttgtttccagattgtc
atcaggaagcagtcatttatcttcaaggaccagaactcacaggataaatctgttccaaaa
gcaactcgggatttgatgacaaatggttccgtctctctcgaaaagaaggaagtctttgtg
tctggagtgaagattttctatggttcccagactggtacagcaaagggattcgcagcagct
cttgctgaagccatctcctccctagacctgccagtggcagttattgatctgaaagaatat
gatccagacgatcatctcctagaagaggttactagtaaaaatgtttgtgccttcctggtt
gccacgtatactgatggtcgaccaactgagaatgcagagtggttctgtaagtggttagag
gaagcatccaatgattttcgatttggcaaaagttacctgaagggtatgagatatgcggtg
tttggtctgggaaattctgcctatgcaagccacttcaacaaggttggcaagaatgttgat
aagtggctgtggatgcttggtgcgcagcgggtgatgacccgaggggagggtgactgccat
gtggtgagaagcaaacatggcagcatcgaggacgacttcagagcttggaaggccaagttc
atcttgcagctccaggttcttcgtaaaggagagaagaaaccctgtgatggcaactgcaag
aaaggcaaatgcgagtctcgtcagcctggatcagaggaagtggagccagggtctcctgct
cgggacagactgcagcagagagaccatgcgcaggagggaccctttgagagcgccagtgtg
gacgagtcagatcccgaggaacagccgagtgtcccttctgtcgtcgacgttgaagacctc
ggcacaattgtgagtcgtgtgaggaaagaaaagagagcaaaggtgcagcaggaagaaaaa
gctggtttgtttgggaatgaggtaacaaatgaagccagtgaaagaagagctatgataact
cccgctctccgagaggcccttactaagcaaggttatcagttgattgggagccactctggg
gtgaagctttgcaggtggacaaagtcgatgctccgagggagaggaggttgctataaacat
acattctatggcatcgaaagccatcgttgcatggaaaccaccccgagcttagcatgtgca
aataaatgtgtcttctgttggcggcaccacaccaatccagtgggcactgagtggcggtgg
aaaatggaccagcctgaaatgatcttaaaggaagccattgaaaaccatcagaatatgatc
aagcaatttaaaggagtcccaggcgtcagagaacaacgctttacagaaggaatgacggta
aagcactgtgcattgtccctggtgggagaacccatcatgtacccagaaatcaacaggttt
ttgaagctgctccatgagagtaaaatctccagtttcctggtcacaaacgcacaattccct
gtggaaatcaggaagctcatgccagttacccagttgtatgtcagcgtggatgcaagcaca
gagggcagcctgaagaaaatcgaccgtccgctcttcaaggacttctggcagagattccgc
gacagcttaaaagccttggcagcaaagcaacagcgtactgtctacagactgactctagtg
aaagcgtggaatgtggatgaactccaagcctatgctgagttggtgtgcctaggaagccct
gacttcatcgaagtgaagggtgttacctattgtggagagagctcagccagcagccttacc
atggccaacgtgccctggtacgaggaggtggtacgcttcgtccacgagctggtggggctg
atccccgactatgaaattgcttgtgaacacgaacattctaattgcctcctgatagctcac
aaaaagtttaaggttgatagagaatggtggacgtggattgattacaaccgcttccaggag
ctcatccaggaatatgaagacagcagtggatcaaaaacattcagtgcaaaggattatatg
gccaaaactcctcactgggcattatttggtgccagtgaaagaggctttgatcccaaggac
ataagatatcagagaaagaacaaatcaaaggatatttctggatgttga
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