Rhinolophus ferrumequinum (greater horseshoe bat): 117025646
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Entry
117025646 CDS
T07722
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117025646 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rfq04812
]
117025646 (CLASP1)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117025646 (CLASP1)
Cytoskeleton proteins [BR:
rfq04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117025646 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EZ
Sec7-like_HUS
Cnd1
HEAT_2
RTP1_C1
UTP20_C
ParcG
DUF5740
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
117025646
NCBI-ProteinID:
XP_032967486
Ensembl:
ENSRFEG00010008277
LinkDB
All DBs
Position
8:complement(92186358..92432887)
Genome browser
AA seq
1637 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGTCVCLIATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPSGSRRNVGMGTTRRLGSSTLGSKPSATKEGAGAVDEE
DFIKAFDDVPMVQIYSSRDLEESINKIREILSDDKHDWEQRVYALKKIRSLLLAGAAEYD
NFFQHLRLLDAAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMSTSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLELLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHNLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSSTGSTNSRASTVSTKSAPTTGSLQRSRS
DIDVNAAANAKSKVSSASGATPFSSAAALPPGSYASLESRHVREDVESVGLDSDGTATKA
EGRIRTRRQNSGSATNVASIPSDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGS
GYSGLAGGSSRGPPVTSSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRD
TSRESSRDTSPARGFPPLASRRHSRSTSALSTAESVGQSDRFGLGQAGRIPGSVNAMRVL
STSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGG
IPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFA
DPHSKIADSEPECEDKEGNLFPTEGSCTRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIE
SLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLG
ALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLS
PSRLWGWSADGLSKHPPPFSQPNSIPTAPSHKTLRRSYSPSMLDYDTENLNSEEIYSSLR
GVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIKSYKEKKIKIIYELSSKRKPQVSRDGGVA
SPASEGRGGSDVVEGGRTALDNKTSLLNTQPPRAFPGPRVRDYNLYPYSDTINTYDKTAL
KEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWE
EHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDCHK
EVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIARESLLQL
LADIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRA
QTTNSNSSSSSDVSTHS
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggagtcctgcctggcgcaggtgttgcagaaggatgtggggaaacga
ctgcaggttggccaagaacttatagactatttctcagataaacagaagtctgctgacctt
gagcatgaccagaccatgttagataaacttgtggatggacttgctacctcttgggtgaac
tctagcaattacaaggtggttcttctggggatggacatcctgtccgcgctggtcacccgg
ctacaggatcggttcaaggcgcagatcggcacagtgctgccaagtttaatagacagactg
ggagatgctaaagactccgtcagggagcaagaccaggcgctgctgctaaagatcatggat
caagctgctaacccccagtacgtgtgggaccggatgctgggaggcttcaagcataagaat
ttccggactcgggaaggcacgtgtgtctgccttattgccacactcaatgcctctggagcg
catactttaacactaagcaagattgtgccacatatatgtaatttacttggagatccaaac
agccaggtccgagatgcagcaataaacagcttagtggagatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccgattgaatgtaattttt
acaaaatttgatgaagtccagaaatctggaaacatgatacaatctgcaaatgataaaaat
tttgatgatgaagattctgtggatggtaacagaccttcctctgccagttctacatcatcc
aaagctccatcaggctcacggagaaatgttggaatggggaccacccgcaggctcggatcc
tccacccttggatccaagccttcagctacaaaagaaggagctggagcagttgatgaagag
gattttattaaagcctttgatgatgtgcctatggtgcagatttactccagccgagacctt
gaggaatccataaacaagatcagggaaatactctctgatgataagcatgactgggagcaa
agagtatacgctctaaaaaagattagatctttacttttggctggtgctgctgagtatgat
aacttctttcaacatttgcgacttttggatgcagcctttaaactatcagctaaggatctg
cggtctcaggtagtgcgggaggcgtgtatcacgttggggcatctgtcatcagttctgggg
aataagtttgaccatggagctgaagccattatgccaacgatctttaatttaattccaaac
agtgccaaaattatgtccacgtctggtgtggtagctgttaggttaatcattcggcacaca
cacatccctaggctaatacctgtcataacaagcaactgtacctctaaatctgttgcagtt
agaagacgctgttttgaatttttagaattacttttacaagaatggcaaacacattccctg
gaacgacacatatcagtattagccgaaacaataaagaagggaatacatgatgccgattcc
gaagcaaggatagaagccagaaagtgttactggggtttccacagtcacttcagcagagag
gcagagcatttataccacaacttggagtcctcctaccagaaggctctgcagtcccatttg
aagaactcggacagcatcgtgtctttgccgcaatctgatcgctcgtcttctagctctcaa
gagagtctgaatcggccgctctctgccaaaagaagttctactggaagtaccaactcaaga
gcttctacagttagtaccaagtccgcaccaacaactgggtccctccagcggtctcgaagt
gacattgacgtgaacgcagcagccaacgccaaatccaaagtctcctcagcttcaggcgcc
acacctttcagctcggcagcggccttgcctccagggtcatatgcatccttagagtccaga
cacgtgagggaagatgtggagtccgtaggccttgactcagatggtactgccactaaagcg
gagggtcggatccgcacgagaaggcaaaattctgggagtgccaccaatgtcgcctctata
ccttctgataatcgaggtcgcagccgcgccaaagtggtttcacaatcccagcgatccaga
tctgctaatcctgctggtgctggcagccggtcaagttctccagggaaattgttgggaagt
ggttatagtggccttgctggaggttcctcaagaggcccacctgtgacatcctcttcagaa
aagcgaagcaagattcccaggagtcagggatgtagccgagaaacaagtccaaaccgaata
ggattagcacggagcagccgtatccctcgacccagcatgagtcaggggtgcagccgcgat
accagccgtgagagcagccgagatacaagccctgctcggggcttccctccgctcgcctct
cgacgtcattccaggtccactagtgctctctccactgctgaatctgttgggcagtcagac
cgatttggccttggccaggcaggaagaatacctggttctgtgaatgccatgcgagtttta
agcacgagtacagaccttgaagctgctgttgccgatgctttgctgttaggagactccagg
agcaagaagaagcctgtgaggcggagatacgagccatatgggatgtattctgacgacgat
gccaacagtgacgcctcgagtgtttgctcggagcgctcctacggttccaggaatggtggc
attccccattatctgaggcagaccgaggatgtcgcagaagttctcaaccactgtgccagt
tcaaattggtcagaaaggaaagaggggcttctagggctgcagaacttgctgaagagccaa
agaacactgagtcgagtagaattgaaaagattgtgtgagatcttcacacgaatgtttgct
gatcctcacagcaaaattgctgattcagaaccagaatgtgaggataaagaaggaaatttg
tttcccacagaaggctcttgtacaagagttttcagtatgtttttggagactcttgtagat
tttataataattcataaagatgacttgcaagactggctttttgttcttctcacacaatta
cttaagaaaatgggagcagatttacttggatctgtgcaagcaaaagttcagaaggctcta
gatgtcacaagggactcctttccatttgatcaacaatttaacattttgatgagatttatt
gtggatcaaactcagactccaaacctcaaggtcaaagttgcaatcctgaagtacattgaa
tctctcgccagacagatggatccaacagattttgtaaattctagtgagaccaggcttgct
gtttctagaattataacctggacaacagaaccaaagagttcagatgtgagaaaggcagca
caaattgtgctgatttctctgtttgaactgaacactcctgaatttaccatgttacttggt
gccttgccaaaaacattccaggatggtgccaccaaactcctgcataaccacctcaagaat
tccagtaacaccagtgtgggctctcccagcaatacaatcggccggactccttcccgacac
cccagcagcaggaccagccccctgacctcacccaccaactgttcccacgggggcctgtct
ccaagtcggttatggggttggagtgccgatgggctatcgaagcacccacctcccttttct
cagcccaactccattcccaccgctccctctcacaagactctcaggcgctcttactctccc
agcatgctggactatgatacagagaacctgaactctgaagaaatctatagttctttgcgt
ggagttacagaagccattgaaaagtttagttttcgaagccaagaggatctaaatgagcca
attaaacgagatggcaaaaaggactgtgacattaagagttacaaagagaaaaaaattaaa
atcatctatgaattatcttccaagagaaaaccccaggtgtcccgggatggcggagtcgcc
tcccctgcctctgagggccgggggggcagtgatgtggtggaaggaggcaggacggctctg
gacaacaagacctccctcctcaacacgcagcctccgcgggccttcccagggccccgcgtg
cgagactacaatctgtatccctactcggacaccatcaacacctacgacaagacggccctg
aaggaggccgtgtttgacgatgacatggaacagctacgagatgtgcccattgaccattct
gacttggtggcggacctcctgaaagagctgtccaaccacaacgagcgggtggaggagcgg
aaaggtgccctgctggagctgctcaagatcacgcgggaggacagcctgggcgtctgggag
gagcacttcaagaccatcctgctcttgctgctggagaccctcggagacaaagatcattcc
atccgagcactggcattgagagttttacgggaaattctgagaaaccagcccgcaagattt
aaaaactacgccgagctgacgatcatgaagactctggaagcccacaaagattgccacaag
gaggtggtgagagctgccgaggaggctgcgtccacgctggccagttccatccaccccgag
cagtgcatcaaagtgctctgccccatcatccagacggccgactaccccatcaacctcgct
gccatcaagatgcagaccaaggtcgtcgagaggatcgccagggagtccctgctgcagctc
cttgcagacatcatccccggcttgctgcagggttatgacaacactgaaagtagtgtgcgg
aaggccagcgtgttttgcttagtggcaatttattccgtaattggagaagagctgaaacct
cacctcgcacagctcacagggagcaagatgaagctactaaacttatatataaagagggcc
cagaccacgaacagcaacagcagctcctcttcggatgtctccacacacagctaa
DBGET
integrated database retrieval system
