Rhinolophus ferrumequinum (greater horseshoe bat): 117032389
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Entry
117032389 CDS
T07722
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117032389 (FREM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
117032389
NCBI-ProteinID:
XP_032979784
Ensembl:
ENSRFEG00010010458
LinkDB
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Position
12:23592557..23761360
Genome browser
AA seq
2179 aa
AA seq
DB search
MSSLNWGGLKAVILLLFLDWASPTFISVNRGVRVMKGSSAFLLGEDLKFAIPKEKDACKV
EVVMNEPITQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDTVKLRLYRFTETDTFVET
FILRVYLLEPDCNIIRTSNNVLEVSRFYGLSRAIDKNLVSFDYDRTAPLECTVRLDPVGT
RLPAHGQMVVVESRPQEPRGDQPHTFFPESQLETELKCPGGSCVPGLKKIGSLKVSCEEF
LLMGLRYQHMDPPSPNTDYISIRLDLTDSRSQVVYKSESAWLPVYIRAGIPNQIPRAAFM
AMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLGDHTRPVSSFTW
KDLSDLQIAYQPPNSSHSERRHYEVELEVYDFFFERSAPITVHISVRTADTNAPRVSWNT
GLNLLEGQSRAITWEQFQIVDNDDIRAVQLVTVDGLQHGRLTVRGGKGFLFTVADLQAGV
VRYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLINNVVIELEEGQTILV
QGSMLRASDIDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYPVPGFFQRDLFNGIIYYRH
FGGEIFDDSFEFVLWDSHEPPNFSVPQVVTIHITPVDDQLPKEAPGVSRNLVVKETDVAY
ITKKHLHFIDTESYDRLLRYTITIPPFFSFHHRHLDAGKLFMVDSIPKLTKNPAALGLKS
FTQDAVNHMKVAYMPPMHDIGPHLQHVQFTFSISNQHGGTLHGICFNITILPVDNQVPEV
FTKSLRVAEGGHCIISTEHILVSDEDTKLDNINLSLQRLPQHGRVELNGLPLNAGVTFSW
GVLHALKVRYQHDGSEILQDDIFFEVTDGTNSIEFVLHVEVFPVNDEPPILKTDLIPVMH
CSEGDEVVITSEYIFATDVDSDDLKLMFMIAREPQHGVVRRAGVTVEQFSQGDVISGAVT
YKHTGGEIGLVPCYDTITLVVSDGEAGPFVNGCGYNGPHPSVPLHESFPVYDLNITVHPV
DNQPPSIAIGTMFVVDEGFSAALTINHLSATDPDTAADELEFVLVSPPQFGYLENILPSE
GFEKSNMGISIASFQWKDVKALHINYVQSRHLRMEPTADQFMVYVTDGQRRSLEIPFYII
INPTNDEAPDFVVQNITVCEGQMKELDSSIINAADLDVPRDNLLFSIVHTPRHGLLVNGV
FSKDFPQHKQPASPGQKHELVHNFSMDLLKNGMRLLYVHDDSESLADGFTIQLSDGKHKI
LKTISVEVTPVNDEKPMLIKKAEITMNMGETRIISSAVLSAIDEDSPGEKIYYVFERLPQ
NGQLQRKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSQNQDSFTFYLWDGSNRSPA
FDCHITIKDMGKGDIVILAKPLVMSKGGRGFLTTSTLLAMDGTDKPEELLYVVTSPPRYG
QVEYVHYPGVPITSFSQMDIAGQIVCYVHQSKAPVSSDTFRFIVSNGLQTKHGVFEVILE
TVDRAFPVVTRNRGLRLAEGATGLLSPELLQLTDPDTPVENLTFLLVQLPQHGQLYLRGA
VVLQHNFTQQDIDRGHVAYRHSGRGSHTDRFTFVATDGTNQGFVVDGRVWQEPVSFIVQV
DQLDKTAPHITYVHSPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIIFRILRGPQHGH
LENTTTGEFIHEKFSQKDLNSKTILYIINPSLEFNSDIMEFQIMDPTGNSAAPQILELKW
SYIEWSQTEYEVCENVGILPLEVTRKGYSMDSAFVSVKVKQVSAAVGKDFTTTPSKLIQF
DPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSYS
FNPNKHKAWKKGIWPPLFPGSSSHTTSGSFHPERRPLPSSKRLAVARGDTPQGFDSTDLY
GLKLRTQGNGKTVHPSSVYRNGTDIIYNYHGMVSLQLEDDRSPAHRRNTKVSIISQPQKT
IKVAELPQADKVESTTDSHFPRQSHLPSFPKNCTLELKGLFHLEESLQKLYKCNGIAWKA
WSPQTKEVEDKSCPVGWHHHSGYCHSLITEQQGTWSTAAQACRENHLGSLVTVLSRQHLR
WLWDFSGREPFWIGLNDQVRPGYWEWIGGEPVTFTNWRRGPPQRSKPGKNCVLVQRQGKW
QIKDCKKGKPHNYVCSRKL
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctgaattggggtgggctgaaagccgtgatcctgctgctcttcctggactgg
gccagccccaccttcatcagcgtgaaccgcggggtcagggtgatgaagggcagctccgcc
ttcttgttgggagaggacctgaagttcgccatccccaaagagaaagatgcttgcaaagtg
gaagttgttatgaatgagccaataacccagagggttgggaaactcactccacaggtcttt
gactgccatttccttcccaatgaagtaaagtacattcacaacggttgcccaattcttgat
gaagacacagtgaagcttagactttacaggtttactgagacagacacgtttgtcgaaacc
tttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtacgagtaacaat
gtactggaggtgtctaggttctatggcctgtcccgagccattgacaagaacctggttagc
tttgactacgacaggacagctcccctggagtgtactgtcaggctggaccctgtgggaact
cggctgccagcccatggccagatggttgtggtggagtctcggccgcaagaaccacgggga
gatcagccacacacttttttccctgagtctcaactggagacagaactcaagtgtccaggt
ggaagctgtgtcccgggattgaagaaaataggaagcctcaaagtgagctgtgaggagttc
ctgctgatggggcttcgctatcagcatatggatcccccttctcccaacaccgattatatc
tccatccgactggacctcacagatagcaggagtcaggtcgtatacaagtcagagagtgcg
tggttgcctgtctatatcagagctggcattccaaatcagattccgagggctgcattcatg
gccatgttcatcctggaagtggatcagtttatcctgacctctttgacgacatccgttctg
gactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaagcccct
ctccagggttatgtgactcacctgggggatcacaccagaccagtgtcctcattcacctgg
aaagatctcagtgacttgcagattgcctatcagccaccaaacagcagccattctgaaagg
agacattatgaggtggagttggaggtgtatgacttcttctttgaaaggagcgcgccgatt
acagttcatatctctgtcagaacagcagataccaatgccccgcgagtgtcctggaacaca
ggtctgaatctcctggagggccaatctcgggccatcacttgggaacagtttcagatcgtc
gacaatgatgacattcgcgctgtccagctagtcactgtggatggcctgcagcatggacgg
ctcacagtaagaggggggaaaggatttctcttcactgtggctgacctgcaggctggagtc
gttcgctatcatcatgatgacagtgactccaccaaagactttgtggtcttccggatattt
gatggccatcatagcatccgccataagtttcctatcaacatcttgcccaaagatgacagc
cccccgttcctcataaacaatgttgtgattgaactggaggagggacagaccatactggtt
caggggtccatgctgagagcttcagacatagactccagtgatgactacatcttctttaat
atcacaaaaccaccacaggctggagagattatgaaaaagccagggccaggcctgataggt
tatcctgtccctggcttctttcagagggatctatttaatggcattatctactatcgtcac
tttggtggtgaaatctttgacgattcttttgaatttgtcctgtgggacagccatgaacct
ccaaatttctcagtgccacaggtggtgacaattcatatcactccagtggatgaccagctt
ccaaaagaggcacctggagtttctcggaatttggttgtcaaggaaactgacgtggcctac
ataactaagaaacatctacattttatagatacagaatcgtatgacaggttgctgcgctat
acaataacaattcctccatttttctccttccaccacagacacttggatgctgggaaatta
ttcatggtggacagcataccaaagctaaccaaaaatcctgcagccctgggcctgaagtca
ttcactcaggatgctgtcaaccatatgaaagtggcctacatgccacctatgcatgacata
ggcccccacctccaacatgtccagttcacattttccatcagtaaccagcatggtggcact
ttgcacgggatctgctttaatatcacgattcttccagtggacaaccaagttcctgaggtt
tttaccaagtctctgagagtggctgagggaggtcactgcatcatcagcacagagcacatt
ttggtttctgatgaggataccaaattggacaacatcaacctctccctgcagagactgcct
cagcatggaagggtggagctgaatgggcttcctctaaacgcaggggtcacattttcttgg
ggagtcctccatgccttaaaagtcaggtatcagcatgatggatctgagattcttcaggat
gacatattcttcgaggtcacagatggcacaaattcaatagaatttgttctacacgttgag
gtattccccgtaaatgatgagccaccaatcctaaagactgatctcatccccgtgatgcat
tgctcagagggagatgaggtggtcatcacctctgaatacatttttgctactgatgtggac
agtgatgatttgaaactgatgtttatgattgctcgagaacctcagcacggggtagtgaga
agagctggagtcacagtggaacagttctctcagggagatgttatctcaggggctgtgacg
tacaaacacacaggtggcgagattggcctggtgccttgttacgataccattacattagtg
gtttcggatggagaagcaggcccttttgtgaatggctgcggctacaatggacctcatcca
tctgttcctcttcatgagtcctttccagtgtatgatctcaacatcacagtacatccagtg
gacaaccaaccaccttcaattgcaataggtacaatgtttgtggtagacgagggtttttca
gcagcccttaccattaaccatttgtcagccactgaccctgacactgcagcagatgagttg
gagtttgttttggtttctccaccccagtttggctaccttgaaaacatactcccttctgag
ggttttgaaaaaagcaatatgggtataagtatagcttcctttcagtggaaagatgtgaag
gctttgcacattaactatgtgcagtctagacatctgaggatggaaccgacggccgaccag
ttcatggtctatgtcacagatgggcagcgacgttccttggagataccattttacattata
atcaaccccacaaatgatgaagctcctgactttgtggtacagaatattactgtgtgtgag
ggtcagatgaaagagctggattcttccatcatcaacgctgctgacctggatgtgcccagg
gacaacttgctgttcagcattgtgcatacaccacgtcacggcctcctcgtcaacggggtg
tttagcaaagactttcctcaacataagcagccagccagccctggccagaagcatgaactt
gttcacaacttttccatggatcttctcaaaaatggaatgaggttgttgtatgtacatgat
gactcagagagccttgctgatggttttactatccagttgtcagatgggaaacataagata
cttaagaccatttcagtagaggtcaccccagtcaatgatgagaaaccaatgctgatcaag
aaggctgaaattacaatgaacatgggtgaaactcgtattatttctagcgccgtactttca
gccatagatgaagactcacccggggagaaaatttactatgtatttgaaaggcttccccaa
aatgggcaacttcagcgtaagatagggagggactgggtccctctctaccctggcatgaaa
tgcactcaggaggaagtggatctgaacttgctgagatacacacacactggggcaatggat
tcccaaaaccaagacagcttcaccttctacctctgggatggcagcaacaggtcacctgca
tttgactgtcacatcaccatcaaggatatgggaaaaggtgatattgtcatccttgcaaaa
ccacttgtgatgtctaaaggaggcagaggtttcttgacgaccagcactctccttgctatg
gatggaacagacaagcctgaagaactgctctatgtcgtcacctccccaccgcgatatggt
caagtggaatatgtccactatcctggagtccctattacaagtttcagtcaaatggatata
gcaggacagatagtctgctacgtacatcagagtaaggcacctgtctccagtgacacattc
agattcattgtcagcaatggactgcagaccaagcatggcgtgtttgaggtcatcctggag
actgtggacagagccttccccgtggtgaccaggaacagggggttgagactggccgaaggg
gccacaggcctgctttccccggaactccttcagctgactgaccctgacacgcccgtggag
aacctcaccttccttttggtccagctcccccaacatggccagctttacctgcggggggca
gtggtgcttcaacacaatttcactcagcaggacatagacagagggcacgtggcctaccga
cattcaggacggggctcccataccgatcgctttacttttgtggctacagacggtacaaac
caaggctttgtggtggatggtcgagtgtggcaagaacctgtttcattcatcgtccaggtg
gaccagttggacaaaacagccccccacatcacatacgtgcattccccttctcaagtggga
ctcctgaaaaatggctgttacgggatttacatcacttcccgtgtgctgaaggcatcagac
cctgacaccgaggacgatcagatcatctttaggattttacgagggccccaacatggacat
ctggagaacacaacaacaggtgaatttatccatgagaaatttagccaaaaggacttaaac
agtaaaaccattctttacatcataaacccatctttggaatttaattcagatatcatggaa
tttcaaatcatggaccccacagggaactctgctgctcctcaaattttggaactgaagtgg
tcttatattgaatggtcacagactgaatacgaggtctgtgagaatgtgggcatattgccc
ttggaagttaccagaaagggctattccatggactccgcttttgtgagtgtaaaggtcaag
caggtgtcagctgcagttggaaaagatttcaccacgactccatctaaactgattcaattt
gacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaa
gatgatgaggtctttgaagtaattctgaactcccctgtgaatgcagttcttggcaccaag
acaaaagctgcagtgaaaattttggactcaaaaggaggacagtgccatccttcatattct
ttcaacccaaacaagcacaaagcatggaagaagggcatttggcccccgctgttcccaggg
tcttcctcacacaccacttctggttcttttcatccggaaagaagacctcttccatcttcc
aagcggctcgcagttgccaggggagacaccccacagggctttgattctacagatctttat
ggactaaagcttaggacccaagggaatggcaaaacagttcatccatcctctgtttataga
aatggaacagacatcatctataattatcatgggatggtttccctgcaactggaggatgac
aggtccccagctcacagaagaaacaccaaagtatccattattagtcagccacaaaagaca
atcaaagtggcagaattgcctcaagcagataaggtggaatccacaactgactcacacttc
cccagacagagccatttgccctcatttccaaagaactgcacactggaattgaaaggactc
ttccaccttgaagaaagcctccaaaagctgtataagtgcaatgggattgcctggaaagct
tggagcccccaaaccaaggaggtggaagacaaatcctgcccagttgggtggcaccatcac
tcaggctactgccactccttgatcacagagcaacaaggcacctggagcacagctgcccaa
gcttgcagggaaaatcacctgggcagccttgtaactgtcctctccagacagcatctgcga
tggctctgggacttcagcggaagggagcctttttggataggtttgaatgaccaagtgcgt
cctggctactgggagtggattggcggtgaacctgtcaccttcaccaactggaggagaggg
ccccctcaacgttcaaagcctggcaagaactgtgttttggttcaaagacaaggaaaatgg
caaataaaggactgtaagaagggcaaacctcacaattatgtgtgctccaggaaactctaa
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