Rhinolophus ferrumequinum (greater horseshoe bat): 117038260
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Entry
117038260 CDS
T07722
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rfq01002
]
117038260 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117038260 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfq04147
]
117038260 (USP13)
Enzymes [BR:
rfq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117038260 (USP13)
Peptidases and inhibitors [BR:
rfq01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117038260 (USP13)
Ubiquitin system [BR:
rfq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117038260 (USP13)
Exosome [BR:
rfq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117038260 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
HYPK_UBA
UBA_4
Motif
Other DBs
NCBI-GeneID:
117038260
NCBI-ProteinID:
XP_032990966
Ensembl:
ENSRFEG00010021639
LinkDB
All DBs
Position
2:complement(64359760..64464231)
Genome browser
AA seq
862 aa
AA seq
DB search
MQRRGALFGMPGGSGSRKMAAGDIGELLVPHMPKIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVKGASGGALPKRRNSKMFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLNSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDNSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQETGTKLKPMYGSGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYMERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSVDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTIPGYGGAASAGASLFG
ATGLDNQPPEEIVAIITSMGFHRTQAVQALRATDSNLERALDWIFSHPECEDSDFVVTME
NNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHK
VCASERPPKDLGYMYFYRRIPS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcggcatgccgggcggcagcggcagcaggaagatggct
gcaggggacatcggcgagctgttggtgccccacatgcccaagatccgcgtccccaggtcc
ggggacagggtctacaagaacgagtgcgccttctcctacgactcgccgaattcagaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtatacatgcacctgaaaagacatgtgcgagagaaggta
aaaggggcatctggtggagctttaccaaaaaggaggaattccaagatgtttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagcactaccaaatattgaggagttacctgccctggta
acaattgcttgtgatgcagttcttaactcaaaatccccatacagaaagcaggacccagac
acatgggaaaatgaattgccagtatccaagtatgccaacaacctcacccagctggacaac
ggagtcaggattcctccaagtggttggaagtgtgccaggtgtgacctgcgggaaaacctc
tggttgaatctgactgatggctccgtgctgtgtgggaagtggttctttgacaactctggg
ggaaatgggcacgccctggagcattacagagacatgggctaccctctagccgtgaaactg
ggaaccatcactcctgatggggcagatgtttattcttttcaagaagaggaacctgttttg
gatcctcatttggccaagcacttggcgcattttggaattgacatgcttcatatgcatggg
acagagaacgggctgcgagacaatgacatcaagccacgagtcagtgagtgggaagtgatc
caagagacggggacaaagctgaagcccatgtatggctcggggtacacgggtctcaagaac
ctgggcaatagctgctatctcagttccgtcatgcaggccatcttcagcatcccggaattc
cagagagcgtatgtaggaaatcttccaagaatatttgactactctcctttagacccaaca
caagatttcaacacacagatgactaagttaggacacgggcttctctcaggccagtattca
aaacctccagtgaaatctgaactcatcgagcaggtgatgaaggaggaacataagcctcaa
cagaatgggatctctccacgcatgtttaaggcctttgtcagcaagagtcatccggaattc
tcctccaatagacagcaggatgcccaggagtttttcttacacttggtgaatctagtagag
aggaaccgcattggctcagaaaacccaagtgatgtttttcggtttttggtggaagaacgc
attcagtgctgtcagacccgaaaagtccgctacatggagagggtggattacctgatgcag
ttacctgtcgccatggaggcagcaaccaacaaagatgaactgattgcctatgaattaacg
agaagggaagcagaagcaaacagaagaccccttcccgagctggttcgtgctaagatacca
tttagtgcctgtcttcaggccttttctgaaccagaaaacgttgatgatttctggagcagt
gccctacaggcaaagtccgcgggcgtgaaaacatcgcgatttgcttccttccctgaatac
ttggtagtgcagatcaagaagttcacttttggtctcgactgggttcccaaaaaatttgat
gtttctgttgatatgccagatctgcttgatattaaccatctccgagccagagggttacag
ccgggagaggaggaacttccggacatcagccccccaatagtcattcctgatgactcaaaa
gatcgcctgatgaaccagctgatagacccatcagacatcgatgagtcgtcagtgatgcag
ttggccgagatgggtttccctctagaagcgtgtcggaaggccgtgtactttactggaaat
atgggagccgaggtggcctttaactggatcatcgttcacatggaagagccagattttgct
gaaccattgaccatacccggttatggaggagcagcttctgctggagcctctctttttggt
gctactgggttggataaccagcctcccgaggagattgtagctatcattacctccatggga
ttccatcgaactcaggctgttcaggcgctacgagccacggacagtaacctggaaagagcc
ctggattggatcttcagccaccctgagtgtgaggacagtgacttcgtggtcacgatggag
aataatgccaatgccaacattatttcggaggctaagcctgaagggcctcgcgtcaaggac
ggatctggaatgtacgaattatttgcattcatcagtcacatgggaacatctacaatgagt
ggccattatgtttgccacatcaaaaaggaaggaagatgggtgatctacaatgaccacaaa
gtctgtgcctcagaaaggccccccaaagacctgggctacatgtacttttaccgcaggata
ccaagctaa
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