Rhodoferax ferrireducens: Rfer_1721
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Entry
Rfer_1721 CDS
T00334
Name
(GenBank) Pseudouridine synthase, RluD
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfr03009
]
Rfer_1721
Enzymes [BR:
rfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Rfer_1721
Ribosome biogenesis [BR:
rfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rfer_1721
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABD69450
UniProt:
Q21XQ3
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All DBs
Position
1860331..1861371
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AA seq
346 aa
AA seq
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MKHIIGGNPVPPAPQATTIRVDEDAAGQRLDNFLMRHLKGVPKTHVYRIIRSGEVRVNKG
RASADARLAAGDTVRLPPLRISERVAEKAEAMTQAMAHGAPARDFPILFEDEQLLVIDKP
AGVAVHGGSGVSFGVIEQLRMARPEAKFLELVHRLDRDTSGILLIAKKRSALTRLQSQFR
ERETGKTYLALVAGHWPANRKVLDKPLYKYLLPGKDGSAGEGERRVKVVSRDDPNGMPSV
TLVKVRETTATSFTLLEVTIKTGRTHQIRVHLASEGYPIAGDDKYGDFGLNKKLLQSGPR
PGLKRMFLHAWRLQFNHPASGERMELLAPLPTELEAFSDHAAPSSS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacacattatagggggcaatccagtcccaccggcacctcaggctacaacgatacgc
gtcgacgaagacgcggctgggcagcgcctggataatttcctgatgcgtcacctcaagggt
gtaccgaaaacccatgtctaccgcatcattcgcagtggtgaagtcagggtgaacaaaggt
cgggcctctgccgatgcacggttggcggcgggtgataccgtgcgtttgccgccgctgcga
atttccgagcgggtggcggaaaaggccgaggccatgacacaagccatggcccatggagcg
ccggcgcgcgactttcccattttgtttgaagatgagcaactgctggtgattgacaaaccg
gccggcgtggccgtgcacggtggttcgggcgtgagttttggcgtgatcgaacaattgcgc
atggccaggcccgaggccaaatttctggaactggtgcaccgcctggaccgggacaccagc
ggcattttgttgattgcgaaaaagcgcagcgcgttgacccggctgcaaagccagtttcgc
gagcgcgaaaccggcaagacctatctggccttggtggcagggcactggccagccaaccga
aaagtgctggacaagccgctctataaatacctgctgccaggcaaggacggcagtgcgggc
gagggcgaacggcgcgtcaaggtggtgtcccgggatgatcccaacggcatgccgtcggtg
acgctggtgaaagtcagggagacgacggcgaccagttttaccttgcttgaagtcactatc
aagaccgggcgcacgcatcagatccgggttcatcttgccagcgagggctatccgattgca
ggtgacgataaatatggcgactttgggctgaataagaaattactgcagtccgggccccgg
cccggcctcaaacgcatgtttttgcatgcctggcgcttgcagttcaaccatcccgccagc
ggcgagcgaatggaactgctggcgcccctaccgactgaacttgaggctttttccgaccat
gccgcaccttcttcatcctga
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