Rhodoferax ferrireducens: Rfer_2133
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Entry
Rfer_2133 CDS
T00334
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfr03021
]
Rfer_2133
03009 Ribosome biogenesis [BR:
rfr03009
]
Rfer_2133
Transcription machinery [BR:
rfr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Rfer_2133
Ribosome biogenesis [BR:
rfr03009
]
Prokaryotic type
rRNA transcription factors
Rfer_2133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KhpA-B_KH
KH_1
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ABD69857
UniProt:
Q21WJ6
LinkDB
All DBs
Position
2312244..2313740
Genome browser
AA seq
498 aa
AA seq
DB search
MNREMLMLVEAISREKNVELDVVFGAVEAALAQATRKIYPGDVDIRVALDRDSGNYETFR
RWHVVPDEAGLQLPDQEILLFEAKEQIPDIEVDEYIEETVESLPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGDNIFVGTVKRMDKGDLIVESGRVEGRLRRTEMIPKENLRVGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMIELFRQEVPEIEQGLLEIKSCARDVGSRAKIAV
LSHDKRVDPIGTCVGVRGTRVNGVTNELAGERVDIVLWSEDPAQFVIGALAPANVSSIVV
DEERHAMDVVVDEENLAIAIGRGGQNVRLASELTGWKINILDAAESAQKQASETDSGRKL
FMEHLDVDEEIADLLIAEGFTSLEQVAYVPLEEMLEIESFDEDTANELRTRAKDALLTME
IAHEESVQAVSLDLRDLQGLTPELIAKLATSGVNNLDDLADLAVDELTEITGQSADDAKT
LIMKAREHWFTNDAASQE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaaatgttaatgctggtagaagccatatcccgtgaaaaaaacgtggagctt
gatgtggtgtttggcgcagttgaagcggcgctggcgcaggcaacaagaaagatttacccc
ggtgatgtcgacatccgggtggcgcttgaccgcgacagtggcaactacgaaacatttcgt
cgttggcatgtggtgcccgatgaggcgggcttgcagttgcccgaccaggaaatcctgttg
tttgaagccaaagaacagattcccgacatcgaggtcgacgaatacatcgaagaaacggtc
gagtcgctgccgattggccgtattggcgccatggcggccaagcaggtcatcctgcaaaaa
atccgcgacgccgagcgtgaaatgctgctcaatgacttcatgtcgcgtggcgacaatatt
tttgttggcaccgtcaagcgcatggacaaaggcgacctcatcgtcgagtcaggccgcgtt
gaaggccgcctgcgtcgcacggagatgatcccgaaagaaaacttgcgcgttggtgacagg
gttcgcgccatgatcatggaagtcgatctgaccttgcgtggtgcgccgatcattctgtcg
cgctcggcgcctgaattcatgatcgagctgttccgtcaggaagtgcccgagattgagcag
ggcttgctggagatcaaatcctgcgcccgtgatgtcggttcccgcgccaagatcgccgtg
ttgtcgcatgacaagcgggtcgatccgattggcacttgtgttggggtccgtggtacccgc
gtcaacggtgtcaccaacgagttggcgggcgagcgcgttgatatcgtgctgtggagcgag
gacccggcccagtttgtgatcggggcgctggccccggccaacgtgtcgagcattgtggtg
gacgaagagcgccatgccatggatgtggtggtcgacgaggagaatctggcgatcgcgatc
ggccggggcggccagaacgtgcgcctggcctccgagctgaccggctggaagatcaacatc
ctggatgcggccgagtcggcccagaaacaagcgagcgaaaccgattcgggtcgcaagctg
ttcatggaacacctcgatgtggacgaagaaatcgccgatttgctgattgccgaaggcttt
accagcctggagcaggtggcttacgtgccgctggaagaaatgctcgaaatcgagagcttc
gacgaagacacagccaacgaattgcgcacccgtgccaaggatgcgctgttgaccatggaa
atcgcgcatgaagagagtgtgcaggcggtttcgctggatttgcgcgacctgcagggcctc
acccctgagctgattgccaagctggcaacaagcggcgttaacaacctggacgacctggct
gacctggccgttgacgaattgacagaaatcaccggccagtctgcggacgatgccaagacc
ttgatcatgaaggcgcgcgaacattggtttaccaatgacgccgcttctcaagagtaa
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