Rhodoferax ferrireducens: Rfer_2136
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Entry
Rfer_2136 CDS
T00334
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfr03016
]
Rfer_2136
Enzymes [BR:
rfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rfer_2136
Transfer RNA biogenesis [BR:
rfr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rfer_2136
Prokaryotic type
Rfer_2136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABD69860
UniProt:
Q21WJ3
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All DBs
Position
2317103..2318119
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AA seq
338 aa
AA seq
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MNAPRARVARRPVHGVLLLDKPLGLSSNDALQKAKWLLRAEKAGHTGTLDPLATGLLPLC
FGAATKFSQLQLDADKTYEAVARLGVKTSTGDAEGELIEERSVKVTEQDLSDVAIRFTGL
IRQIPPMHSALKKDGKALYEYARAGIEVEREGRDVTIYKLNMALAPVDTEYLTIKMIVKC
SKGTYIRTLAEDIGEALGCGAHLTALRRVETGGFDVAQCVTLAALEAMTDEERLSQLLPV
ESLLSEHTVVTLDTENAGRFLSGLRRRGNWPDNGQVAVYGEKPRALLGTGHVVAGELIPG
RLLSPLEIEKIVGDCESGSSVLHAAPPSALQTTDFDEI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccgcgtgcacgggttgccaggcgccccgtgcacggggtgctgttgctggac
aagcctttgggactgtcgagcaatgacgccttgcaaaaagccaagtggctgttgcgggct
gagaaggccggccacaccggcacgctcgatccactggccacgggtctgttgccgctgtgc
tttggtgccgccaccaagttcagccagcttcagctggatgcggacaaaacgtacgaggcg
gtggcgcggctgggtgtgaaaacaagtactggcgacgccgagggcgagctcattgaagag
cggtcggtgaaggtgacagagcaagacctgagtgatgtggcgatacgcttcaccgggctg
attcggcagataccgccgatgcacagcgccttgaaaaaagacggcaaggccctgtacgaa
tacgcgcgggccggtatcgaggtggagcgggaaggtcgtgacgtcacaatttataagcta
aatatggctctagcccccgtggatactgaatatttaactattaaaatgatagttaaatgc
agcaaaggcacttacatccggaccctggctgaggatatcggtgaagccctgggatgcggc
gcgcatctgacggcgctacgccgggttgagacgggtggcttcgatgtggcgcagtgtgtg
acgctggcggcattggaggcgatgacggatgaagagagattgagccagctgctgccggtg
gagtcgctgctgagcgagcacacggtcgtcacgctggacactgaaaatgcagggcggttc
ctgagcggcttgcgccgccggggaaattggcctgacaacgggcaagttgccgtttatggc
gaaaaaccgcgtgccttattgggcactggccatgttgtggcaggtgagttgataccaggg
cggctattgagtccgcttgagattgagaaaatagtgggagattgcgaatcggggtccagc
gtgctgcacgcagccccgccctcagccctccagacgacagactttgacgagatttaa
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