Rhodoferax ferrireducens: Rfer_2158
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Entry
Rfer_2158 CDS
T00334
Name
(GenBank) Glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00500
Starch and sucrose metabolism
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
Module
rfr_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Rfer_2158
Enzymes [BR:
rfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Rfer_2158
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
DUF3459
Glyco_hydro_31_2nd
NRN1
DUF5696
Motif
Other DBs
NCBI-ProteinID:
ABD69882
UniProt:
Q21WH1
LinkDB
All DBs
Position
complement(2347090..2349249)
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AA seq
719 aa
AA seq
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MKTNELITAVWPGHAYPRGAHWDGEGVNFALFSQHAEKVELCLFNETGRHERQRIEIRER
TDDIWHCYLPEARPGLAYGYRVHGPYKPEEGHRFNPNKLLVDPYAKDLIGQLRWGDALYG
YTIGSKREDLSFDRRDSAPLVPKSRVVEPAFTWGDDRRPTVPWQDMVIYELHVRGFTMTH
PEVPAQLRGTYAGLGCAPVVDYLKRLGVTTIELLPVHSYVSERHLAIKGLSNYWGYNTLG
FFAPERRYSASGNVKEFKTLVKTLHSAGIEVIIDVVYNHTCEGNQLGPTLSLRGIDNASY
YIANASNHRYYDDFSGCGNTVNIEHPRTLQWMMDSLRYWVEEMHVDGFRFDLASALAREA
GEVENLGGFFDAIRQDPTLNRVKLIAEPWDLGSGGYRVGNFPHGWAEWNDRYRNGMRAYW
KGDDGQIGELAQRLTGSHDLYGWSGKRSHASINFVTAHDGFTLHDLVSYNDKHNEANGED
NRDGNSHNLSWNCGAEGESDNPAIRALRERQKRNLLATLLLSQGLPMLLAGDERGHTQLG
NNNVYCQDNQLAWLDWTPSPERDALHTFVQRLIKLRREHPSLRRRNFFEGKPQDGDTDKD
VCWLKPDGGEMMGQDWSDNQARCLAMLVSGSGISERGAHGETLHDDDFLLLLNSHHAEIP
FALPPVRGGEWLLLLDTATQTIPPADNGLPLASPPAWGQASYPLQSRSLVLLTRARTLV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaatgagttaatcacggcagtttggcctgggcacgcctatccgcgcggcgcc
cactgggacggtgagggcgtcaatttcgcgctgttctcgcaacatgccgagaaagtagag
ttgtgtctgttcaacgagaccggtcgtcacgaacgtcaacgcatcgagattcgcgaacgc
accgacgacatctggcactgctacctgcccgaggcccgcccgggtctggcctacggctac
cgcgtgcacggcccctacaaacccgaagagggccaccgcttcaaccccaacaagttgttg
gttgatccctatgccaaagacctcatcggccaattgcgatggggcgatgcgctctatggc
tacaccatcggcagcaaacgcgaggacctctcgttcgaccgccgcgacagtgcaccactg
gtgcccaagagccgcgtggtcgagcccgctttcacatggggcgacgaccgccggcccacg
gtaccgtggcaggacatggtcatctatgagttgcacgtgcgcggcttcaccatgacccat
ccggaggtgccagcgcagttgcgcggcacctacgcggggctcggctgtgccccggtggtc
gactacctgaaacgcctgggggtcaccacgattgaattgctgcccgtacatagctacgtc
agtgaacgccacctggccatcaaggggctttcaaactactggggctacaacaccctgggt
ttcttcgccccagagaggcgctacagcgcctcgggcaatgtcaaggaattcaagaccttg
gtgaagacgctgcactcagccggcatcgaggtgatcattgacgtggtctacaaccacacc
tgcgaaggcaatcagcttgggcccacgctctccctgcgcggcatcgacaacgcgtcctac
tacatcgccaacgccagcaaccaccggtattacgacgacttcagcggttgtggcaacacc
gtcaacattgagcacccgcgaacgcttcagtggatgatggactctttgcgctactgggtt
gaagaaatgcatgtcgacggttttcgcttcgaccttgcttctgcgctggcgcgcgaagcc
ggtgaggtagagaacctgggcggttttttcgatgccatccgccaggacccgacgctcaac
cgcgtcaagctgatcgccgagccctgggacttgggaagcggtggttatcgggttggcaac
ttcccgcacggctgggccgagtggaacgatcgctaccgtaacggcatgcgcgcctactgg
aaaggtgacgacgggcagatcggtgagcttgcacagcgcctcaccggctcgcatgacctc
tacggctggtcgggcaaacgcagccacgccagcatcaacttcgtcacggcgcacgacggc
ttcacgctgcacgacctggtctcctacaacgacaagcacaacgaggccaatggcgaagat
aaccgcgacggcaacagccacaacctatcctggaactgcggcgccgagggcgagagtgac
aaccccgctattcgggcgctgcgggagcggcagaagcgcaacctgttggccacgttgctg
ctgtcacaaggcttgcccatgctgctggctggtgacgaacgcggccacacgcaactgggc
aacaacaacgtctactgtcaggacaaccagctggcctggctggactggaccccgagtccg
gagcgcgatgctttgcatacttttgtgcagcgcttgatcaaactgcgccgggagcacccg
tctctgcgtcggcgcaacttcttcgaaggtaagccgcaggatggcgacacggacaaggat
gtgtgctggctgaaacccgacggcggcgagatgatggggcaggattggagcgacaaccaa
gcacgatgcctggcgatgctggtgtcgggcagtggcatttcggagcgcggcgcacatggc
gaaacactgcacgacgatgactttctgctgctcctgaacagccaccatgccgagataccc
tttgccctgccgccggtgcgcgggggcgaatggctgctgctgcttgacaccgcgacccag
accattccaccggccgacaacggtctgccgctcgcttcgccgccagcgtgggggcaggcg
agttatccgctgcaatctcgctccctggtactgctgacccgcgccaggacgcttgtatga
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