Rhodoferax ferrireducens: Rfer_2319
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Entry
Rfer_2319 CDS
T00334
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00010
Glycolysis / Gluconeogenesis
rfr00020
Citrate cycle (TCA cycle)
rfr00260
Glycine, serine and threonine metabolism
rfr00280
Valine, leucine and isoleucine degradation
rfr00310
Lysine degradation
rfr00380
Tryptophan metabolism
rfr00620
Pyruvate metabolism
rfr00630
Glyoxylate and dicarboxylate metabolism
rfr00640
Propanoate metabolism
rfr00785
Lipoic acid metabolism
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
rfr01210
2-Oxocarboxylic acid metabolism
rfr01240
Biosynthesis of cofactors
Module
rfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rfr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rfr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rfr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rfer_2319
00020 Citrate cycle (TCA cycle)
Rfer_2319
00620 Pyruvate metabolism
Rfer_2319
00630 Glyoxylate and dicarboxylate metabolism
Rfer_2319
00640 Propanoate metabolism
Rfer_2319
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rfer_2319
00280 Valine, leucine and isoleucine degradation
Rfer_2319
00310 Lysine degradation
Rfer_2319
00380 Tryptophan metabolism
Rfer_2319
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Rfer_2319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfr04147
]
Rfer_2319
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Rfer_2319
Exosome [BR:
rfr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Rfer_2319
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
FAD_binding_2
GIDA
AlaDh_PNT_C
HI0933_like
Pyr_redox_3
Lycopene_cycl
FAD_binding_3
NAD_binding_8
Thi4
Motif
Other DBs
NCBI-ProteinID:
ABD70037
UniProt:
Q21W16
LinkDB
All DBs
Position
complement(2543370..2544797)
Genome browser
AA seq
475 aa
AA seq
DB search
MSKQFDVIVIGAGPGGYIAAIRAAQLGKNVACVDEWKNSKGGPALGGTCTNTGCIPSKAL
LQSSEHFDHASHHFAEHGIEVKGVSMDAAKMVARKDAVVKQNNDGILYLFKKNKVSFFHG
RASFVKAVEGGYEIKVAGAAEETLLGQQVIVATGSSARALPGAPFDESQVLSNEGALAMT
AVPKKLGLIGSGVIGLEMGSVWRRLGSEVTILEGLPAFLGVVDAQIAKEAHKAFVKQGLK
IELGVTVGDVKVGKKGVSVAWTNAKGEAQKLDVDKLIVSIGRVPNTVGLNAEAVGLQLDE
RGAIVVDGDCKTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVI
YTSPEIAWVGRTEQQLKADGVAYRAGTFPFLANGRARALGDTTGMVKMLADATTDEILGV
HIVGPMASELIAECVVAMEFRASSEDIARICHAHPTLSESTKEAALAVDKRTLNF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaatttgacgtgatcgtgattggtgctggccccggcggctatatcgctgcc
attcgtgccgcccaactcggcaaaaacgtggcctgtgtggatgagtggaaaaacagcaag
ggcggcccggcgctgggcggcacctgcaccaacacgggctgtattccgtccaaggccctg
ctgcagtcgtcggagcatttcgaccatgccagccatcactttgccgagcacggcatcgag
gtcaaaggcgtgagcatggatgcggccaagatggtggcacgcaaggatgccgtggtgaag
caaaacaacgatggcatcctgtacctgttcaaaaagaacaaggtcagcttcttccatggc
cgcgcctcgtttgtgaaagcagtggagggcggctacgaaatcaaggtggcaggcgctgcc
gaagaaacgctgctgggccagcaagtcattgtggccacgggttctagcgcccgcgcgctg
ccgggtgcgccgttcgacgagagccaggtcctgtccaacgaaggcgctttggccatgacg
gccgtgccgaagaagctgggtttgattggctcgggtgtgatcggcctggagatgggctcg
gtctggcgtcgtttgggttctgaagtgaccattctggaaggtctgccggctttcctgggc
gtggtcgacgcgcagattgccaaggaagcgcacaaagcctttgtcaagcagggtctcaag
atcgagctgggcgtgacggttggcgacgtcaaggtcggcaaaaaaggtgtcagcgtcgcc
tggaccaacgccaagggtgaggctcaaaaactggacgtggacaagttgattgtgtcaatt
ggccgggtgccaaataccgtcggcttgaacgccgaagccgtcggcctgcaactcgacgag
cgcggcgcgattgtggtggacggtgactgcaaaaccaacctgcccggcgtgtgggcagtc
ggtgacgtggtgcgtggcccgatgctggcgcacaaggcggaagaagaaggcgttgcggtg
gccgagcgcatcgcgggccagcatgggcatgtcaacttcaacaccattccgtgggtgatt
tacaccagcccggagattgcctgggtgggacgcaccgagcagcaactcaaggccgacggc
gtggcctacagagcgggtaccttcccgttcttggccaatggccgtgcccgcgctctgggg
gacaccaccggcatggtcaaaatgctggccgatgccaccacggatgaaattttgggcgta
cacattgtcggccccatggccagcgagttgattgccgaatgtgtggtggcgatggaattc
cgcgccagcagcgaggacattgcacgcatttgccacgcccacccgactttgagcgagtcc
accaaggaagcggcgctggcggtggacaaacgcacactgaatttctaa
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