KEGG   Rhodoferax ferrireducens: Rfer_2319
Entry
Rfer_2319         CDS       T00334                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rfr  Rhodoferax ferrireducens
Pathway
rfr00010  Glycolysis / Gluconeogenesis
rfr00020  Citrate cycle (TCA cycle)
rfr00260  Glycine, serine and threonine metabolism
rfr00280  Valine, leucine and isoleucine degradation
rfr00310  Lysine degradation
rfr00380  Tryptophan metabolism
rfr00620  Pyruvate metabolism
rfr00630  Glyoxylate and dicarboxylate metabolism
rfr00640  Propanoate metabolism
rfr00785  Lipoic acid metabolism
rfr01100  Metabolic pathways
rfr01110  Biosynthesis of secondary metabolites
rfr01120  Microbial metabolism in diverse environments
rfr01200  Carbon metabolism
rfr01210  2-Oxocarboxylic acid metabolism
rfr01240  Biosynthesis of cofactors
Module
rfr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rfr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rfr_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rfr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rfr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Rfer_2319
   00020 Citrate cycle (TCA cycle)
    Rfer_2319
   00620 Pyruvate metabolism
    Rfer_2319
   00630 Glyoxylate and dicarboxylate metabolism
    Rfer_2319
   00640 Propanoate metabolism
    Rfer_2319
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Rfer_2319
   00280 Valine, leucine and isoleucine degradation
    Rfer_2319
   00310 Lysine degradation
    Rfer_2319
   00380 Tryptophan metabolism
    Rfer_2319
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Rfer_2319
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rfr04147]
    Rfer_2319
Enzymes [BR:rfr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Rfer_2319
Exosome [BR:rfr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Rfer_2319
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored FAD_binding_2 GIDA AlaDh_PNT_C HI0933_like Pyr_redox_3 Lycopene_cycl FAD_binding_3 NAD_binding_8 Thi4
Other DBs
NCBI-ProteinID: ABD70037
UniProt: Q21W16
LinkDB
Position
complement(2543370..2544797)
AA seq 475 aa
MSKQFDVIVIGAGPGGYIAAIRAAQLGKNVACVDEWKNSKGGPALGGTCTNTGCIPSKAL
LQSSEHFDHASHHFAEHGIEVKGVSMDAAKMVARKDAVVKQNNDGILYLFKKNKVSFFHG
RASFVKAVEGGYEIKVAGAAEETLLGQQVIVATGSSARALPGAPFDESQVLSNEGALAMT
AVPKKLGLIGSGVIGLEMGSVWRRLGSEVTILEGLPAFLGVVDAQIAKEAHKAFVKQGLK
IELGVTVGDVKVGKKGVSVAWTNAKGEAQKLDVDKLIVSIGRVPNTVGLNAEAVGLQLDE
RGAIVVDGDCKTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVI
YTSPEIAWVGRTEQQLKADGVAYRAGTFPFLANGRARALGDTTGMVKMLADATTDEILGV
HIVGPMASELIAECVVAMEFRASSEDIARICHAHPTLSESTKEAALAVDKRTLNF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaagcaatttgacgtgatcgtgattggtgctggccccggcggctatatcgctgcc
attcgtgccgcccaactcggcaaaaacgtggcctgtgtggatgagtggaaaaacagcaag
ggcggcccggcgctgggcggcacctgcaccaacacgggctgtattccgtccaaggccctg
ctgcagtcgtcggagcatttcgaccatgccagccatcactttgccgagcacggcatcgag
gtcaaaggcgtgagcatggatgcggccaagatggtggcacgcaaggatgccgtggtgaag
caaaacaacgatggcatcctgtacctgttcaaaaagaacaaggtcagcttcttccatggc
cgcgcctcgtttgtgaaagcagtggagggcggctacgaaatcaaggtggcaggcgctgcc
gaagaaacgctgctgggccagcaagtcattgtggccacgggttctagcgcccgcgcgctg
ccgggtgcgccgttcgacgagagccaggtcctgtccaacgaaggcgctttggccatgacg
gccgtgccgaagaagctgggtttgattggctcgggtgtgatcggcctggagatgggctcg
gtctggcgtcgtttgggttctgaagtgaccattctggaaggtctgccggctttcctgggc
gtggtcgacgcgcagattgccaaggaagcgcacaaagcctttgtcaagcagggtctcaag
atcgagctgggcgtgacggttggcgacgtcaaggtcggcaaaaaaggtgtcagcgtcgcc
tggaccaacgccaagggtgaggctcaaaaactggacgtggacaagttgattgtgtcaatt
ggccgggtgccaaataccgtcggcttgaacgccgaagccgtcggcctgcaactcgacgag
cgcggcgcgattgtggtggacggtgactgcaaaaccaacctgcccggcgtgtgggcagtc
ggtgacgtggtgcgtggcccgatgctggcgcacaaggcggaagaagaaggcgttgcggtg
gccgagcgcatcgcgggccagcatgggcatgtcaacttcaacaccattccgtgggtgatt
tacaccagcccggagattgcctgggtgggacgcaccgagcagcaactcaaggccgacggc
gtggcctacagagcgggtaccttcccgttcttggccaatggccgtgcccgcgctctgggg
gacaccaccggcatggtcaaaatgctggccgatgccaccacggatgaaattttgggcgta
cacattgtcggccccatggccagcgagttgattgccgaatgtgtggtggcgatggaattc
cgcgccagcagcgaggacattgcacgcatttgccacgcccacccgactttgagcgagtcc
accaaggaagcggcgctggcggtggacaaacgcacactgaatttctaa

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