Rhodoferax ferrireducens: Rfer_2321
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Entry
Rfer_2321 CDS
T00334
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00020
Citrate cycle (TCA cycle)
rfr00785
Lipoic acid metabolism
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01200
Carbon metabolism
rfr01210
2-Oxocarboxylic acid metabolism
Module
rfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Rfer_2321
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Rfer_2321
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Rfer_2321
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ABD70039
UniProt:
Q21W14
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All DBs
Position
complement(2546160..2549051)
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AA seq
963 aa
AA seq
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MSETTSQGASSTSSVYQAYQANTYLFGGNAPYVEEMYENYLANPGGVPDSWRDYFDALQH
VPAADGSNAKDVPHLPVINAFAERAKQGGTKVVVANVDAEMGRKRTAAQQLIAAYRNVGV
SWADLDPLKRAERVVIPELEPSFYGFSDADQEAVFDTSNTFFGKNSMSLRELMNALRQTY
CGTIGAQFMHTTDQNHKRWWQQKLESIRSKPSFSVEQQKHILDRLTAAEGLERFLHTKYV
GQKRFSLEGGESFIACMDELIQSAGVKGIQEIVIGMAHRGRLNVLVNSLGKMPGDLFAEF
DHTAPEELTSGDVKYHQGFSSDVTTRGGPVHLSLAFNPSHLEIVNPVVEGSVRARMDRRA
DPLGKQVLPVLVHGDAAFSGQGVNMETFALAETRGYSTGGTVHIIINNQIGFTTSDPRDS
RSTLYCTDVIKMIEAPVVHVNGDDPEAVVLATQLALEFRLEFRKDVVVDIVCFRKLGHNE
QDTPALTQPLMYKKIAAHPGTRSLYADKLAAQGLGATLGDDMVKAFRAAMDAGKHTVDPV
LTNFKSKYAVDWAPFIGQKWTDAAETAIPLGEWKRLAEKITTIPASVTPHNLVRKVYEDR
AAMGRGDLPVDWGMGEHMAFASLVASGYPVRLSGEDCGRGTFTHRHSVIHDQNREKWDVG
TYIPLQNVTDNQAPFVVIDSILSEEAVLAFEYGYASNEPNTLVIWEAQFGDFANGAQVVI
DQFIASGEVKWGRVNGITLMLPHGYEGQGPEHSSARLERFMQLSADTNMQVVQPTTASQI
FHILRRQMVRNIRKPLIILTPKSLLRAKDAASPVSEFTKGSFQTIIPEQKALKADKVKRL
VACSGKVYYDLVKKREEIAADDVAIIRVEQLYPFPHKAFAAELKRYPNVTEVVWCQDEPQ
NQGAWFFVQHYIYENMFDGQKRGYSGRAASASPAVGYAHLHQEQQKALVEGAFAKLKGTV
LTK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacaacgtctcaaggggcgagttcgacatcgtcggtctatcaggcctatcag
gccaatacctatctttttggtggcaacgcgccgtacgtcgaagagatgtacgaaaactac
ctggccaatcccggtggtgtgccagacagttggcgtgactacttcgatgccttgcagcat
gtgcccgccgcagatggcagcaacgccaaagacgtgccccacctccccgtcatcaatgca
tttgccgagcgtgccaaacagggcggcaccaaggtcgtggtggccaatgttgatgccgaa
atggggcgcaagcgcaccgccgcgcagcagttgattgcagcctaccgcaacgttggcgtc
agttgggcggatctggaccctttgaagcgcgccgagcgggtggtgattcctgaattggag
ccctcgttttacggtttcagcgatgccgaccaggaagcggtgtttgacaccagcaacacc
ttctttggtaaaaacagcatgagcctgcgcgagttgatgaacgcgttgcggcagacttat
tgcggcaccatcggtgcgcagttcatgcacaccacggatcagaaccacaaacgctggtgg
caacaaaaattggagagtattcgttccaaaccgagcttctcggtggagcaacaaaaacac
attctggatcggctgaccgccgccgaaggcttggagcggtttttgcacaccaagtatgtg
gggcaaaagcgcttttccctggaaggtggcgagagttttatcgcctgcatggatgagctg
attcaatcggctggcgtcaagggcatccaggaaatcgtgattggcatggcgcaccggggg
cgtctgaacgtgctggtgaattcgctgggcaagatgcctggtgatctgtttgccgagttc
gaccataccgcacccgaagaattgaccagcggggacgtgaaataccaccagggtttcagt
tctgacgtcaccacccgcggtggcccggtgcatttaagtctggcgttcaacccctcgcat
ctggagatcgtcaacccggtggttgagggttcagtgcgcgcccgcatggatcgccgcgct
gacccgctcggcaagcaagtgctgccggtgctggtgcatggcgacgcggccttttcgggc
cagggtgtcaacatggaaacctttgcgctggctgaaacccggggttactccacgggtggc
acggtgcatatcatcatcaacaaccagatcggtttcaccaccagcgatccacgcgacagc
cgctccacactgtattgcaccgatgtgatcaagatgatcgaggcgccggtggtgcatgtg
aacggcgatgacccggaagccgtggtgctggccactcagttggcgctcgagttccgtctg
gagtttcgcaaggacgtggtggtcgacatcgtttgtttccgcaagctcggccacaatgag
caggacacaccggcgctgacgcagccgctgatgtacaagaaaattgcagctcaccccgga
acgcgcagcctgtacgccgacaaactggcagcgcagggtttgggggccacgctcggcgat
gacatggtcaaggccttccgcgccgccatggatgcgggcaaacacacggtagacccggta
ctgaccaacttcaagagtaagtacgctgtggactgggcgccctttattggccagaagtgg
accgatgccgccgagaccgcgatccccctgggtgagtggaagcgtctggctgaaaaaatc
accaccattccggccagcgtgacgccgcacaacctggttagaaaggtctatgaagatcgc
gccgccatgggcaggggcgacctgccggtggactggggcatgggcgagcacatggccttt
gcctcgctggtggccagcggctacccggtgcgcctgagcggcgaagactgcggtcgcggc
acctttacccaccggcattcggtgattcacgaccaaaaccgtgaaaagtgggatgtgggc
acctatatcccgctgcaaaacgtgaccgacaaccaggctccgtttgtcgtcatcgactcg
atcctgtcagaagaggccgtgctggcctttgagtatggctacgcgtcgaacgaacccaac
acgctggtgatctgggaagcccagtttggcgattttgccaatggggcgcaagttgttatc
gaccagttcatcgcctccggcgaggtgaagtggggccgcgtcaacggcatcaccctgatg
ctgccgcacggctacgaaggccagggccccgagcacagctcggcccgactggagcgcttc
atgcagctcagtgccgacaccaatatgcaggtcgtgcagccgaccacggcgagccagatt
ttccacattttgcggcgacagatggtgcgcaacattcgcaagcccttgatcatcctgacg
cccaagtcgctgctgcgcgccaaggatgcagcgtctcccgtgtccgaatttaccaagggc
agcttccagaccatcattccggaacaaaaagcgctgaaggccgacaaggtcaagcgcctg
gtggcttgttccggcaaggtctattacgacctggtcaaaaagcgcgaagaaatcgctgcc
gacgacgtggcgattattcgggtcgagcagttgtatccgtttccacacaaggcgtttgcc
gctgaactcaaaagatatccgaatgtgacggaggtcgtatggtgtcaggatgagccgcaa
aaccagggcgcctggttttttgtgcagcattacatctacgaaaacatgtttgacgggcaa
aaacggggctattcgggccgcgcggcgtccgcatcgcccgccgtgggttatgcgcacctg
caccaggagcagcaaaaagcgctggttgaaggcgcattcgccaagctcaaaggcactgtc
ctcaccaaataa
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