Pseudorhizobium flavum: RFYW14_03384
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Entry
RFYW14_03384 CDS
T07144
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00020
Citrate cycle (TCA cycle)
rfv00640
Propanoate metabolism
rfv00660
C5-Branched dibasic acid metabolism
rfv01100
Metabolic pathways
rfv01110
Biosynthesis of secondary metabolites
rfv01120
Microbial metabolism in diverse environments
rfv01200
Carbon metabolism
Module
rfv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rfv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RFYW14_03384
00640 Propanoate metabolism
RFYW14_03384
00660 C5-Branched dibasic acid metabolism
RFYW14_03384
Enzymes [BR:
rfv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RFYW14_03384
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
DUF6224
GARS_A
RimP_N
Motif
Other DBs
NCBI-ProteinID:
CAD6617422
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Position
1:complement(3403840..3405033)
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AA seq
397 aa
AA seq
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MNIHEYQAKALLKSYGAPVAEGVAIMKAEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFR
ELGPDAKGGVRLAKSVDEVIANVKDMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC
SLLVDRSVGRVAFVISTEGGMDIEAVAHDTPEKIHTIAIDPETGVTADDVAKISKALELT
GAAAEDAKSLFPILYKAFNEKDMSLLEINPLIVMQNGHLRVLDAKVSFDGNALFRHDDVR
ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG
GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMRCDVIAEGVVAAVQEVGLKVPLVVRLE
GTNVELGKKILNESGLAITAADDLDDAAKKIVAAIEA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccatgaatatcaggccaaggctctcctgaagagctacggtgcgccggtcgca
gaaggcgtggccatcatgaaggccgaagaagcggaagctgcagcgaagtcgctgcctggc
ccgctctacgtggtcaagagccagatccatgccggcggccgtggcaagggcaagttcagg
gaactgggaccggacgccaagggcggcgtccgtctcgccaagtccgtcgacgaagtcatc
gccaacgtcaaggacatgctcggcaacacgctggtgaccgcccagacgggcgaagccggc
aagcaggtcaaccgcctctacatcgaggacggcgccgacatcgcccgcgagctttactgc
tcgctgctggtcgatcggtcggtcggtcgcgttgccttcgtcatttccaccgagggtggc
atggacatcgaggcggtcgcgcatgatacgccggagaagatccacacgatcgccatcgat
ccggagacgggcgtgacggcggacgatgtcgcgaagatctccaaggcgctcgaactgacg
ggcgcggcggcggaagacgccaagtcgctcttcccgatcctctacaaggccttcaacgag
aaggacatgtcgctgctcgagatcaacccgctgatcgtcatgcagaacggccatctgcgc
gttctcgacgccaaggtttcgttcgacggcaacgcgctgttccgtcacgacgacgtgcgg
gcgctgcgcgacgagaccgaggaagacgccaaggaaatcgaagcgtccaagtgggacctc
gcctatgtggccctcgacggcaacatcggctgcatggtcaacggcgcaggcctcgccatg
gcgacgatggacatcatcaagctctacggcaaggagccggcaaacttctgcgacgtcggc
ggcggcgccggcaaggagaaggtggcggcagccttcaagatcatcacggccgacccgaag
gtcgagggcatcctcgtcaacatcttcggcggcatcatgcgctgcgacgtcatcgcggaa
ggcgtggtggctgcggtgcaggaagtcggcctgaaggttccgctcgtcgtgcgcctggaa
ggtacgaatgtcgaactcggcaagaagatcctgaacgaatccggcctcgcgatcactgcg
gctgacgaccttgacgacgcggcgaagaagatcgtcgcggcgatcgaagcctaa
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