Rubrivivax gelatinosus: RGE_04910
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Entry
RGE_04910 CDS
T01803
Name
(GenBank) putative lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rge01011
]
RGE_04910
Enzymes [BR:
rge01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RGE_04910
Peptidoglycan biosynthesis and degradation proteins [BR:
rge01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RGE_04910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
BAL93836
UniProt:
I0HLE9
LinkDB
All DBs
Position
complement(517882..519909)
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AA seq
675 aa
AA seq
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MNALQRITRRAPLRPLAAATLAFALALPAAQAQTGDDLVLDARAAAQKGDRAKLSALRTA
ALFASHPLAPWVDYWELSGRLRDADVAEVEAFYRRWSGQYVEDRLRNDWLLELGKRRDWA
SFARDVPRFRMNDDREVTCYSRLVEHQAGRDVRQAALEAWYAQRDADDGCALLAQSMFAA
GRFNVDDVWQQARLSFELERQNSARGQRSLRAAVQLLGPEIARAVDDAVANPARTLAKPD
TPPSVAQMAMLKLASNDPAGAAAQLAAGGWEQRLGRRDAAFAWAFAGKWAAVLQQPQALD
YYRRAWTLAGSAATGWSDDTLAWGVRAALRAGEQPDRWTLVARAIDTMSPAERADPAWVY
WRARAMAAGAAAGAAGDAERAASRAMLQSIAGQMHFYGQLAAEDLGLPFVLPAPPRTLQP
AEREAARSNPGFARALQLIALGLRSEGQREWNFSLRGLAERDLLAAAQMACEREVWDRCI
FTSDRSKTEIDVAQRFPTPHRAELTQTARRVGLDPAYVYGLIRQESRFITVAQSGAGASG
LMQVMPGTARIVARRIGLDYKPAMLHDPETNLLLGTSYLKMVLDNFAGSQPMATAGYNAG
PNRPRRWRDAPTVEPAAWIEAIPIGETRDYVKKVLSNAVYYAAVLGSTPPSLKARLGAPI
GPADASAPPVDRDLP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccctgcaacgcatcacccgccgggcaccgctgcgcccgctcgcggcagccacg
ctggctttcgcgctcgccctgcccgccgcccaggcgcagaccggcgacgacctcgtgctc
gacgcccgcgccgccgcgcagaagggcgaccgcgccaagctgtcggcgctgcgcaccgca
gcgctcttcgcgtcgcatccgctggcgccctgggtcgactactgggagctgtcgggccgg
ctgcgcgacgccgacgtcgccgaggtcgaggccttctaccgccgctggagcggccagtac
gtcgaggaccggctgcgcaacgactggctgctggaactgggcaagcgccgcgactgggcc
agcttcgcccgcgacgtgccgcgttttcgcatgaacgacgatcgcgaggtgacctgctac
agccgcctcgtcgagcatcaggccgggcgcgacgtgcgtcaggcggcgctggaagcctgg
tacgcccagcgcgacgccgacgacggctgcgcgctgctggcgcaatcgatgttcgccgcc
ggccgcttcaacgtcgacgacgtctggcagcaggccaggctgtccttcgagctcgaacgc
cagaactcggcgcgcggccagcgttcgctgcgcgccgcggtgcagctgctggggcccgag
atcgcgcgcgccgtcgacgacgcggtcgccaacccggcgcgcacgctggccaagcccgac
acgccgccctcggtggcgcagatggcgatgctcaagctcgcctccaacgacccggccggc
gccgccgcgcagctcgccgccggcggctgggagcagcgcctgggccggcgcgacgccgcc
ttcgcctgggccttcgccggcaagtgggccgcggtgctgcagcagccgcaggcgctggac
tactaccgtcgcgcctggacgctggccggcagcgccgccaccggctggagcgacgacacc
ctggcctggggcgtgcgcgctgcgctgcgcgccggcgagcaacccgaccgctggacgctg
gtggcgcgtgcgatcgacacgatgagcccggccgaacgtgccgacccggcctgggtctac
tggcgcgcgcgggcgatggccgccggcgccgcggccggggccgccggcgacgccgaacgt
gccgcttcgcgcgcgatgctgcagtccatcgccggccagatgcacttctacggccagctc
gccgccgaggacctgggcctgcccttcgtgctgccggcgccgccgcgcacgctgcagccg
gccgaacgcgaggccgcgcgcagcaaccccggtttcgcacgcgcgctgcagctgatcgcg
ctgggcctgcgcagcgaaggccagcgcgaatggaacttctcgctgcgcggcctggccgaa
cgcgacctgctggccgccgcgcagatggcctgcgaacgcgaggtctgggaccgctgcatc
ttcaccagcgatcgcagcaagaccgagatcgacgtcgcccagcgtttcccgacgccgcac
cgcgccgagctgacgcagaccgcgcgccgcgtcggcctggacccggcctacgtctacggc
ctgatccgccaggagtcgcgcttcatcaccgtcgcccagtcgggcgccggcgccagcggg
ctgatgcaggtgatgccgggcacggcgcgcatcgtcgcgcgccgcatcggcctggactac
aagccggcgatgctgcacgaccccgagaccaacctgctgctgggcaccagctacctgaag
atggtgctcgacaacttcgccggctcgcagccgatggccaccgccggctacaacgccgga
cccaaccgcccgcgccgctggcgcgacgcgccgaccgtcgagcccgccgcctggatcgag
gcgatcccgatcggcgagacgcgcgactacgtgaagaaggtgctgtccaacgccgtctac
tatgcggccgtgctgggcagcaccccgccttcgctgaaagcccggctgggcgcgccgatc
ggcccggccgatgcgagtgctcctcccgtcgatcgtgacctcccctga
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