Rubrivivax gelatinosus: RGE_35940
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Entry
RGE_35940 CDS
T01803
Symbol
hupR
Name
(GenBank) hydrogenase transcriptional regulator HupR
KO
K19641
two-component system, NtrC family, response regulator HupR/HoxA
Organism
rge
Rubrivivax gelatinosus
Pathway
rge02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGE_35940 (hupR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rge02022
]
RGE_35940 (hupR)
Two-component system [BR:
rge02022
]
NtrC family
HupT-HupR (hydrogenase synthesis regulation)
RGE_35940 (hupR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
bpMoxR
AAA_3
Motif
Other DBs
NCBI-ProteinID:
BAL96933
UniProt:
I0HV96
LinkDB
All DBs
Position
3833609..3835105
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AA seq
498 aa
AA seq
DB search
MNAPDSDFAAARALGSAGRELPWVLVVDDEQRSQEAMRRTLDEEFRVLTAPDAEAARGML
ERHAIQVVLCDQRMPGLTGVEFFKQIRETWPDVVRILVSGYTDSHDIIAGVNEAGIFQYV
LKPWTPDHLLGTVRSAVEASRLQHGLQRLELDLRAGPRALQQRRDATLREVRRAYDFDRI
VRAPGSPLDGVCAMAERVARYDLSALILGESGTGKELLARAIHCASPRMAGPFVVVNCGA
VPDTLLETELFGHKRGSFTGAVEDRIGLFQQADGGTIFLDEVGDTSAAFQVKLLRVLQEG
EVRPVGSSRTLPVDVRVIAATHRDLEAAVRAGSFREDLYYRIAGVSLEVPPLRERPGDVI
AIAEQLLADVSAELGRPASGLDDDCRAVLMGYPWPGNVRELRNELARALALSDELRLPAR
ALSRRLLQGQTGAAASTTAAALPAAGRLQDRLDAVEAMILRETMLRLQWNKTQAAAELGL
SRMGLRAKLQRFGLESPP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgactccgatttcgccgcggcccgcgccctgggttccgccggccgtgaa
ctgccctgggtgctggtcgtcgacgacgagcagcgctcgcaggaggcgatgcggcgcacg
ctggacgaggagttccgcgtgctcaccgcgcccgacgccgaagccgcacgcggcatgctc
gagcgccacgcgatccaggtcgtgctctgcgaccagcgcatgccggggctgaccggcgtc
gagttcttcaagcagatccgcgagacctggcccgacgtcgtgcgcatcctcgtgtcgggc
tacaccgacagccacgacatcatcgccggcgtcaacgaggcgggcatcttccagtacgtg
ctcaagccctggacgcccgaccatctgctgggcaccgtgcgcagcgccgtcgaggccagc
cggctgcagcacggcctgcagcgcctggaactcgacctgcgcgccggcccgcgtgcgctg
cagcagcgccgcgacgccacgctgcgcgaggtgcgccgcgcctacgacttcgaccgcatc
gtgcgcgccccgggcagcccgctggacggcgtctgcgcgatggccgaacgtgtcgcacgc
tacgacctgtcggcgctgatcctcggcgagtcgggcaccggcaaggagctgctggcgcgg
gcgatccactgcgcctcgccgcgcatggccgggcctttcgtcgtcgtcaactgcggcgcc
gtgcccgacacgctgctggagaccgagctcttcggccacaagcgcggctcgttcaccggc
gccgtcgaagaccgcatcggcctgttccagcaggccgacggcggcacgatcttcctcgac
gaggtcggcgacacctcggcggcgttccaggtcaagctgctgcgtgtgctgcaggaaggc
gaggtgcggccggtgggctcgtcgcgcacgctgccggtggacgtgcgcgtaatcgccgcg
acccaccgcgacctcgaagccgcggtgcgcgccggcagcttccgcgaggacctgtactac
cgcatcgccggcgtctcgctggaagtgccgccgctgcgcgagcgcccgggcgacgtcatc
gccatcgccgagcagttgctggccgacgtctcggccgagctcggccgcccggccagcggc
ctggacgacgactgccgcgccgtgctgatgggctacccctggccgggcaacgtgcgcgag
ctgcgcaacgagctggcgcgcgccttggcgctcagcgacgagctgcgcctgccggcgcgg
gcgctgtcgcgccggctgctgcagggccagaccggcgccgcggcgtcgaccaccgccgcc
gcgctgccggccgccgggcggctgcaggaccggctcgacgccgtcgaggcgatgatcctg
cgcgagaccatgctgcgcctgcagtggaacaagacccaggccgccgccgagttgggcctg
tcgcgcatgggcctgcgcgccaagctgcagcgcttcggcctggagtcgccgccgtga
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