Rubrivivax gelatinosus: RGE_36460
Help
Entry
RGE_36460 CDS
T01803
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase HemD
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00860
Porphyrin metabolism
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01120
Microbial metabolism in diverse environments
rge01240
Biosynthesis of cofactors
Module
rge_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGE_36460 (hemD)
Enzymes [BR:
rge01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
RGE_36460 (hemD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
BAL96985
UniProt:
I0HVE8
LinkDB
All DBs
Position
complement(3892804..3893577)
Genome browser
AA seq
257 aa
AA seq
DB search
MRIIVTRPADQAAAWVARLQALGADAAALPLIGIEPAEDPAPLRAAWQSLADYALVMFVS
PNAVAHFFALRPAGCEWPATTLAGSVGPGSSAALREAGVGERVVEPAADARAFDSEALWA
QLCDRDWAGRRVLVVRGEDGREWLAETLRGRGAFVEFVAAYRRRPPQPDEAGRALLEASL
AFPGEHLWHFSSSEAVGHLRALAPGADWSRSRAVASHPRIAAAARALGFAEVAELPPSVE
VVAEWARRDPPIESASL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatcatcgtcacccggccggcggatcaggcggccgcctgggtggcgcgcctgcaa
gccctcggggccgacgccgcggccctgccgctgatcggcatcgaacccgccgaggacccg
gcgccgctgcgtgcggcctggcagtcgctggccgattacgcgctggtgatgttcgtcagc
cccaacgccgtggcccatttcttcgcgctgcggcccgccggctgcgagtggccggcgacg
acgctggccggctcggtcggcccgggctcgtcggcggcgctgcgcgaggccggcgtcggc
gagcgcgtcgtcgagccggcagccgatgcccgggccttcgattccgaagcgctgtgggcg
cagctctgcgaccgcgactgggccggccgccgcgtgctcgtcgtgcgtggcgaggacggc
cgcgaatggctggccgagacgctgcgcgggcgcggcgccttcgtcgagttcgtcgccgcc
taccgccgccggccaccgcagcccgacgaagccggccgcgcgctgctcgaggcctcgctc
gccttcccgggcgagcacctgtggcatttcagcagcagcgaagcggtgggccatctgcgg
gcgctcgcgcccggcgccgactggtcgcgctcgcgggccgtggcctcgcatccgcgcatc
gcggctgcggcacgggcgctcggttttgccgaggtcgccgagctgccgccctcggtcgag
gtggtggccgaatgggcccgtcgcgacccgccgatagaatcggcgtctctgtga
DBGET
integrated database retrieval system
