Rhodanobacter glycinis: CS053_05255
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Entry
CS053_05255 CDS
T06136
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CS053_05255 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgl03400
]
CS053_05255 (uvrB)
DNA repair and recombination proteins [BR:
rgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CS053_05255 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CS053_05255 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
AIP3
Motif
Other DBs
NCBI-ProteinID:
QEE23977
UniProt:
A0A5B9E159
LinkDB
All DBs
Position
1276395..1278413
Genome browser
AA seq
672 aa
AA seq
DB search
MTDRFELVAPYQPAGDQPEAIQRLSEGFEAGLASQTLLGVTGSGKTYTIANVIERVQRPT
IVMAPNKTLAAQLYGEFREFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLSRRDSIIVATVSAIYGLGNPEDYLSLRLILAKGERIDQRKLIHQLTELQ
YTRNEMELRRGTYRVHGEIIDVFPAESETEALRIELFDGEVENMALFDPLTGETIRKIPR
YTVYPRTHYASTRESVLNAIETIKVELKERLEYLYRENKLLEAQRLEQRTRFDLEMMAEV
GYCQGIENYSRHLTRREPGEPPPTLFDYLPADGMLVVDESHVTVPQLGAMYKGDRSRKET
LVEFGFRLPSAMDNRPLRFEEWEARVPRAIYVSATPRAYELDKSGDAVTELVVRPTGLID
PEVEVRPVRTQVDDLLGEAHKRIAMGDRVLVTTLTKRMAENLTEYLAEHDVKVRYLHSDI
ETVERSEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAVLDADKEGFLRSTGSLIQTIG
RAARNVRGKAILYADEVTRSMRAAMDETARRREKQMLYNEANGITPKTVVRRIADIMEGA
RSEAPARGRGSRGKARAVAEPTAAYASMDPAQAAAAIKKLEARMYKHAQNLEFEDAAKLR
DEIHQLREQSLR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgattcgaacttgtcgcgccctaccagcccgcgggtgaccaacccgaggcc
attcaacgcctcagcgagggtttcgaggccggtttggcatcgcagaccctgcttggcgtc
accggttcgggcaagacctacaccatcgccaacgtgatcgagcgcgtgcagcgcccgacc
atcgtgatggcaccgaacaagacgctggcggcgcagctgtacggcgagttccgggagttc
tttccgcacaacgcggtggagtacttcgtcagctattacgactactaccagccggaagcc
tacgtggtggcgtcggataccttcatcgagaaggacgcctcgatcaacgagcacatcgag
cagatgcggctgtcggcgaccaaggcgctgctgtcgcgccgcgactcgatcatcgtggcc
acggtgtcggcgatctacggcctgggcaatcccgaggattacctgagcctgcggctgatt
ctggccaagggcgagcgcatcgaccagcgcaagctgatccatcagctcaccgaactgcag
tacacccgcaacgagatggaattgcgtcgtggcacctatcgcgtgcacggcgagatcatc
gatgtgttcccggccgagtcggaaaccgaagcgctgcgcatcgaactgttcgatggcgaa
gtggagaacatggcgctgttcgacccgctcaccggcgagacgatccgcaagattccccgc
tacacggtttatccgcgtacccattacgccagcacgcgcgaaagcgtgctcaacgccatc
gagacgatcaaggtcgaactgaaggagcggctggaatacctgtatcgcgagaacaagctg
ctcgaggcgcaacggctggagcagcgtacgcgtttcgacctggagatgatggccgaggtg
ggttattgccagggcatcgagaactactcgcgccacctgacccggcgcgaacccggcgag
ccgccgccgaccttgttcgactacctgccggctgatggcatgctggtggtcgacgaatcg
cacgtcaccgtgccgcagctgggcgcgatgtacaagggcgaccgttcgcgcaaggaaacc
ctggtggaattcggtttccgcctgccatcggcgatggacaaccgaccgctgcgtttcgaa
gagtgggaagcgcgcgtgccgcgcgccatctatgtttccgccacgccacgcgcctacgag
ctggacaagtccggcgacgcagtgaccgagctggtggtgcgcccgactggcctgatcgat
ccggaagtggaagtgcgcccggtgcgcacccaggtcgacgacctgctcggcgaggcgcac
aagcgcattgccatgggcgatcgcgtgctggtcaccacgctgaccaagcggatggccgag
aacctcaccgaatacctggccgagcacgacgtgaaagtgcgctacctgcactcggacatc
gagacggtcgagcgcagcgagatcatccgcgatctgcggctgggcgaattcgacgtgctg
gtcggcatcaacctgctgcgcgaaggcctggacatgcccgaggtttcgctggtggcggtg
ctcgatgcggacaaggaaggcttcctgcgctccaccggctcgctgatccagaccatcggc
cgcgccgcccgcaacgtgcgcggcaaggcgatcctgtacgccgacgaggtgacccgttcg
atgcgcgcggcgatggacgagaccgcgcggcgccgcgagaagcagatgctgtacaacgag
gccaacggcatcacgccgaaaacggtggtgcgccggattgccgacatcatggaaggtgcg
cgcagcgaggcgccggcacgcgggcgcggcagtcgtggcaaggcgcgcgccgtggccgag
ccgacggcggcgtatgcctcgatggacccggcccaggccgcggccgcgatcaagaaactg
gaagcgcggatgtacaagcacgcccagaatctggaattcgaggatgcggcgaagttgcgt
gacgagatccaccaactgcgcgagcagtcgctgcgttga
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