Mediterraneibacter gnavus: RGna_04775
Help
Entry
RGna_04775 CDS
T06719
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGna_04775 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgn03019
]
RGna_04775 (rny)
Messenger RNA biogenesis [BR:
rgn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RGna_04775 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
QHB22858
LinkDB
All DBs
Position
complement(926480..928033)
Genome browser
AA seq
517 aa
AA seq
DB search
MPVILCVIIAAALALIVGVVTRYLTITNLKNNAESKIGNAEAKAREIIDDAVKTAETTKK
EALLEVKEESIRTKNDLEKETKERRSELQRYEKRVLAKEEAVDKRSEAIEQREAKFTAKE
EHLRQREAKVEELSQKRVQELERISGLTSEQAKEYLLKTVEEDVKHETAKMVRELESQAK
ENADKKAKEYVVNAIQRCAADHVAETTISVVQLPSDEMKGRIIGREGRNIRTLETLTGVE
LIIDDTPEAVVLSGFDPIRREVARIALERLIVDGRIHPARIEEMVEKAQKEVDSMIREEG
EAAAIEVGVPGIHPELLRLLGRMKFRTSYGQNALKHSIEVAQLSGLLAGEIGLDVRMAKR
AGLLHDIGKSIDHDVEGSHIQIGVDLCRKYKESATVINAVEAHHGDVEPQTLIACVVQAA
DTISAARPGARRETLETYTNRLKQLEEIANQFKGVDKSFAIQAGREIRVMVVPDQVTDDD
MVLMAREIANQIEFELEYPGQIKVNVIRESRVTDYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtaattttatgtgtaattattgcggcggccctcgcgttgatagtcggtgtcgta
actcgctatctgaccattaccaatctgaagaacaatgcggaatccaagattggaaatgcg
gaagcgaaagcaagagaaatcattgacgatgccgtgaaaactgctgaaacgacaaaaaag
gaagctcttttggaagtgaaggaagagtccatccggacgaagaatgatcttgaaaaagag
acgaaagaaagaaggtcggaactgcagcgctatgaaaagcgtgtgctggcaaaagaagaa
gcagtagacaaacgttccgaagctattgagcagcgtgaagcaaaatttacagcaaaagag
gaacatttaagacagcgtgaagccaaagtggaagaactcagtcagaaacgagtgcaggaa
ctggaaagaatctcaggtcttacctccgagcaggcaaaagaatatctgttgaaaactgtt
gaagaagatgtgaaacatgaaacagcaaagatggtcagggagctggagtctcaggcaaaa
gagaacgcagacaagaaagcaaaagagtatgttgtcaatgcgattcagagatgtgcagct
gaccatgtagcggagactacgatttcagtcgtgcagcttccaagtgatgagatgaaagga
aggatcatcggacgagagggacgaaacatcagaactcttgagactctgacaggtgtagag
cttatcattgatgatacaccggaggcagttgtgttatccggatttgatccgatccgaaga
gaagttgcccgtattgctcttgaacgcttgatcgtggatggacgtatccatccggcaaga
attgaagagatggtggaaaaagcacagaaagaagtagattctatgattcgcgaagaagga
gaggcagcagccatcgaggttggtgtaccgggtatccatccggaattgctgcgtctgctt
ggacgtatgaaattcagaacaagctacggacagaatgcgctgaagcattccatcgaggtt
gctcagttgtcaggacttctggcaggagagatcgggctggatgtgcgtatggcgaaaaga
gccggacttctgcacgacatcggtaaatcgatcgatcacgatgtggaaggatctcacatt
cagattggtgtggatctttgcagaaagtacaaagaatcagcgactgtgatcaatgcagtc
gaagcacatcatggcgatgtagagcctcagactttgatcgcctgtgttgtacaggctgca
gatacgatctcagcagcaagaccaggtgcaagaagagagacattagagacatatacaaac
agattgaaacaattagaagagattgcaaaccagttcaaaggtgttgacaaatcttttgct
attcaggcaggtagagagattcgagtaatggtagttccagatcaggtaactgatgatgat
atggtacttatggccagagagattgctaatcagattgaatttgaattagagtatcctggt
cagatcaaggtaaatgtgatccgcgaatcacgcgtcacggattacgcaaaatag
DBGET
integrated database retrieval system
