Mediterraneibacter gnavus: RGna_12000
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Entry
RGna_12000 CDS
T06719
Name
(GenBank) KR domain-containing protein
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00520
Amino sugar and nucleotide sugar metabolism
rgn00541
O-Antigen nucleotide sugar biosynthesis
rgn01100
Metabolic pathways
rgn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
RGna_12000
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RGna_12000
Enzymes [BR:
rgn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
RGna_12000
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Motif
Pfam:
Polysacc_synt_2
Polysacc_syn_2C
Epimerase
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
NAD_binding_4
RmlD_sub_bind
KR
NmrA
adh_short
F420_oxidored
Shikimate_DH
IPPT
DUF5300
Motif
Other DBs
NCBI-ProteinID:
QHB24136
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Position
2412422..2413468
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AA seq
348 aa
AA seq
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MSVFKDKTLMITGGTGSFGNAVLNGFLETDIKEIRIFSRDEKKQDDMRHEFQAKMPEASN
KIKFFIGDVRDLASVKNAMHGVDYIFHAAALKQVPSCEFFPIEAVKTNVLGTENVLTAAI
EEGVKSVICLSTDKAAYPVNAMGTSKAMMEKVIVAKSRTVDPEKTKICCTRYGNVMCSRG
SVIPLWIEQIKAGNPITITEPSMTRFIMSLEEAVDLVLFAFENGTSGDILVQKAPACTIE
VLAKAVTELFAPGHEIKVIGIRHGEKMYETLLTNEECANAIDMGEFYRVPCDKRDLNYDK
YFKEGDVERNILTEFNSSNTELLDVEQVKEKLLTLQYIRDELAEWENR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatttaaagataaaacattgatgatcacaggtggaacaggttctttcggaaat
gctgttctcaatggatttttagaaaccgatatcaaagaaatccgtattttctcacgtgat
gagaaaaagcaggatgatatgagacatgaatttcaggcaaaaatgccggaagcatcaaat
aaaattaagttctttattggggatgttcgtgacttggcctctgtaaagaatgcaatgcac
ggggtagattatatcttccatgcagcagctttaaaacaggttccatcttgtgagttcttc
ccgattgaagcagtaaagacaaatgttcttggtacagaaaatgtattgactgcagcaatc
gaagaaggtgtaaaatctgtaatctgtctttctacagataaagcagcgtaccctgtcaat
gcaatgggaacaagtaaggcaatgatggaaaaagtcattgtagccaaatcaagaacagta
gatccggaaaaaacaaaaatctgctgtactcgttacggaaatgttatgtgctcccgtgga
tctgtaattcctctttggatcgaacagattaaagcaggaaatccaatcacaattacagaa
ccttctatgaccagatttattatgagcttagaagaagcagtagacttagtgttatttgct
tttgaaaatgggacaagcggagatattttagtacagaaagctccggcatgtacgattgag
gtgttagcaaaggcagtaacagaattgtttgcaccgggacatgaaattaaagtgatcggt
attcgtcatggtgaaaaaatgtacgagacattacttacaaatgaagaatgtgctaatgcg
attgatatgggtgagttctaccgtgtgccatgtgataagagagacttgaattacgataag
tatttcaaagaaggtgatgtggagagaaacatattaacagaattcaattccagcaacaca
gaattactggatgtggagcaagtaaaagagaagttgttgacactgcagtatatcagagat
gaattagcggagtgggagaatcgataa
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