Rhodococcus gordoniae: NMQ04_01265
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Entry
NMQ04_01265 CDS
T08682
Name
(GenBank) site-specific integrase
Organism
rgor
Rhodococcus gordoniae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Arm-DNA-bind_4
Phage_int_SAM_3
Motif
Other DBs
NCBI-ProteinID:
UTT48878
LinkDB
All DBs
Position
complement(271086..272246)
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AA seq
386 aa
AA seq
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MATIESYETAAGKRYMVRFRTPDRTQSKKRGFRTKREAEAFAATVEVEKMRGEYVPPSLG
RITIEELAVDWLARKQADVAPSNYRTLESGWRTHVQPRWGKVRIADVELSRVEQWIAQMQ
RNGSGATTVIRCYGVLAGILDDAVKSRRLATNPARGVENLPRKTTKRHVYLSADDVGRLA
HGAGKHRPLVLTLAYTGIRWGEAVALRARDVEFRRRRLTIHDNAVQLGVDHAVGRTKSRR
TRSVPVPGFVLDELAVLCEGRSPDDLVFPGPNGGYLPRPKSHGGWFAGAVKRSGVQRVTP
HDLRHTAASLSISAGVNVLALARMLGHTSAKVTLDTYADLFDSDLDVVAETLHTRYAQAS
VPNVCPKPALEPAPATTKKPLTCLNR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccatcgagtcgtacgagaccgcggcaggcaagcggtacatggttcgtttccgc
acgcccgatcgcacgcagtcgaagaagcgtggtttccgtaccaaacgcgaggcggaagcc
ttcgccgcgaccgtcgaggtcgagaagatgcgcggcgagtacgtcccgccatcactcggt
cgcatcaccatcgaggagttggccgtcgactggcttgcacgcaagcaagccgacgtcgcg
ccctccaactaccggactctcgagtcgggctggcgcacgcacgttcaaccgcggtggggc
aaggtccgcatcgccgacgtcgagctgtctcgcgtcgaacaatggatcgctcagatgcaa
cgcaacggcagcggcgccacaaccgtcatccggtgctacggagtcctggcaggcatcctc
gacgacgcggtgaagtcgcggcggctggccaccaacccggcccgaggcgtcgagaatctg
ccgcgcaagaccaccaagcggcacgtgtacctgtccgccgacgacgtcggacggctggca
cacggggcgggcaagcatcgacctctcgtgctcaccctcgcctacacaggcatccggtgg
ggtgaagccgtggccctgagggcccgcgacgtcgagttccgcaggcgacgcctgacgatc
cacgacaacgccgtgcagctcggcgtggatcacgccgtaggacggaccaagagcagacgt
acccggtccgttcccgtgcccgggttcgttctcgacgagctcgccgtcctgtgtgaaggc
cgaagcccggacgatctcgtcttccccggcccgaacggtgggtacctgccacgacccaaa
tcgcacggaggctggttcgccggggcggtcaagcgctccggggtccagcgggtcactccg
cacgatctacgacacacagcagcctcgctgtcgatcagtgccggagtgaacgtcctggcg
ctcgcccggatgctcgggcacacctcggcgaaggtcacgctcgacacctacgccgacctc
ttcgacagcgatctggacgtggtagccgaaaccctccacacccggtacgcgcaggcaagt
gtgcccaatgtgtgcccaaagccggctctcgagcctgccccagcaaccacgaaaaagccc
ctcacctgcctgaacaggtga
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