Rhodococcus gordoniae: NMQ04_07345
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Entry
NMQ04_07345 CDS
T08682
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00300
Lysine biosynthesis
rgor00470
D-Amino acid metabolism
rgor01100
Metabolic pathways
rgor01110
Biosynthesis of secondary metabolites
rgor01120
Microbial metabolism in diverse environments
rgor01230
Biosynthesis of amino acids
Module
rgor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NMQ04_07345 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NMQ04_07345 (lysA)
Enzymes [BR:
rgor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NMQ04_07345 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UTT49996
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All DBs
Position
1583786..1585207
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AA seq
473 aa
AA seq
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MNAHPAGPRHAQIPHAPNLPDRPADTAALNTLAPHVWPRNAARGEDGVMRIAGIPVTELA
EKYGTPLFVVDEDDFRSRCREIAEAFGPTAKVHYASKAFLCSEIARWVHQEGLSLDVASG
GELAVALHAGFPAEKIAMHGNNKSVRELQAAVSAGVGHIVLDSLAEIDRLDAVAGEAGVV
QDVLIRVTVGVEAHTHEFISTAHEDQKFGLSLAGGHAMQAVRRVFGADNLRLVGLHSHIG
SQIFDVDGFELAAHRVIGLLRDIVAEFGVDKTAQMSIVDLGGGLGISYVPSDDPPPVADL
AAKLGDIVRNESALAGLPAPTLAVEPGRAIAGPGTVTLYEVGTLKDVEVGSGHVRRYISV
DGGMSDNIRTSLYQAEYESRLVSRVSEAEPVVSRVVGKHCESGDIVIRDAWMPADVAPGD
LLAVAATGAYCYSMSSRYNLLPRPAVVAVKDGVSRVLLRRETVEDLLNLEVSE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcaccccgcgggaccgcgtcacgcccagatcccgcacgccccgaacctgccc
gaccgtccggccgacaccgcggcgctcaacacgctggccccgcacgtgtggccccgcaac
gccgcgcgcggcgaggacggcgtcatgcgcatcgccggtatcccggtgaccgagctcgcc
gagaagtacggcacgccgctgttcgtcgtcgacgaggacgacttccgctcccgctgccgg
gagatcgcggaagccttcggtccgacggcgaaggtgcactacgcgtcgaaggcgttcctg
tgcagcgagatcgcgcggtgggtccaccaggagggactctcgctcgacgtggcgtccggc
ggtgagctcgccgtcgccctgcacgccggcttccccgccgagaagatcgcgatgcacggc
aacaacaagtccgtccgcgaactgcaggccgccgtgagcgccggggtcgggcacatcgtg
ctcgactcgctcgccgagatcgaccggctcgatgcggtcgccggtgaggccggtgtcgtc
caggacgtgctgatccgggtgaccgtgggcgtcgaggcccacacccacgagttcatctcc
accgcgcacgaggaccagaagttcgggctctcactcgccggtggccatgccatgcaggcc
gtgcgccgggtcttcggcgccgacaacctccgactcgtcggcctgcacagccacatcggc
tcgcagatcttcgacgtcgacggcttcgaactcgccgcgcaccgcgtcatcggtctgctg
cgcgacatcgtcgccgagttcggtgtcgacaagaccgcgcagatgagcatcgtcgacctc
ggcggtggcctgggcatctcgtacgtgccgagcgacgatccgccgccggtcgccgatctc
gccgccaagctgggcgacatcgtccggaacgagtccgcactcgccgggctcccggctccg
accctcgcggtcgaacccgggcgggccatcgccggaccgggcaccgtcaccctctacgag
gtgggaaccctcaaggacgtcgaggtcggctccggacacgtccgccgctacatcagcgtc
gacggcggcatgagcgacaacatccgcacatcgctgtaccaggcggagtacgaatcgcgc
ctcgtctcccgcgtgagcgaggccgaaccggtggtctcgcgggtcgtcggcaagcactgc
gagagcggcgacatcgtcatccgcgacgcctggatgcccgccgacgtcgcacccggtgat
ttactggcggtcgcggcgacgggtgcatactgctactcgatgtcgagcaggtacaacctg
ctgcctcgccccgccgtcgtggcggtcaaggacggtgtctcgcgcgttctgctgcgccgc
gagaccgtggaagatctgctcaacttggaggtttcggagtga
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