Ruminococcus gauvreauii: NQ502_00255
Help
Entry
NQ502_00255 CDS
T08490
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rgv
Ruminococcus gauvreauii
Brite
KEGG Orthology (KO) [BR:
rgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rgv03009
]
NQ502_00255 (rimO)
Enzymes [BR:
rgv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NQ502_00255 (rimO)
Ribosome biogenesis [BR:
rgv03009
]
Prokaryotic type
ribosomal protein modification factors
NQ502_00255 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
CCDC22_CC
Motif
Other DBs
NCBI-ProteinID:
UWP59536
LinkDB
All DBs
Position
complement(50447..51784)
Genome browser
AA seq
445 aa
AA seq
DB search
MQILFISLGCDKNLVDSEEMLGLLENRGYTVTDDETAADIIVVNTCCFIHDAREESIQTI
LDMAKYRTEGRAKALVVTGCLAQRYQEEIRQEIPEVDAVLGTASYDEIADALDEVLRGNA
YTSFQDIDRLPDVDAGRLITTGGAYEYLKIAEGCEKHCTYCIIPRIRGGYRSVPMEKLLT
QARYLAEAGVKELIVIAQETTLYGKDLYGEKSLHRLLRELCRIDGLVWIRLMYCYPEEIY
PELIRTIREEPKICHYMDIPIQHCSDQILKRMGRRTSKQDLEKIITEIREQIPDMVLRTT
LITGFPGETKEDHEELKQFVADMAFDRLGVFTYSPEEDTPAASMADQIAEEVKEERQAEL
MELQQDVSLELGEERVGQKLFVFIEGKVADEDAYVGRTYADAPGIDGYIFVNTQTPLMTG
DFVQVTVTGSLEYDLIGEIADEYTE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttatttatctcgcttggctgtgataaaaaccttgtagattccgaggagatg
ctggggttattggagaacaggggatataccgtcacagacgatgagacggctgcagacatc
attgttgtaaatacctgctgtttcattcacgatgccagggaagagagcatccagacgata
ctggatatggcgaagtaccgtacggaaggaagggcaaaggcgctggttgtgacgggatgc
cttgcacagcgctatcaggaagaaattcggcaggagatcccggaagtggatgccgtactc
ggaaccgccagctatgatgagatagcggatgctctggatgaagtgctacgggggaatgcc
tatacatcgtttcaggatatcgaccgtcttcctgatgtggatgcggggcgtctcatcaca
acaggcggcgcatatgaatatctgaaaatagcggagggttgtgaaaaacactgtacttac
tgtatcatacccaggatacgcggaggctaccggagcgtgccgatggagaaacttctcaca
caggcgcggtatctggcggaggccggggttaaggaactgatcgtgattgcccaggagaca
acgctctacggcaaagatctttacggagaaaagtcgctgcaccggctgctgcgggagctc
tgccgcattgacggcctggtttggatccgtctcatgtactgctacccggaagagatctat
cctgagctgatccggacgatcagggaggaaccgaagatctgccattatatggatattccg
attcagcactgcagcgaccagatactgaaacggatgggacgcagaacttcaaagcaggat
ctggaaaaaattatcacagaaatccgggaacagatacccgacatggtgcttcggaccaca
ctgatcaccggctttccgggagagacaaaggaagatcatgaggaattgaaacagtttgtt
gccgatatggcattcgaccgccttggtgtctttacttactctccggaagaagatacacca
gccgcctccatggcagatcagattgcggaggaggtcaaggaggaacgtcaggcggaattg
atggaactgcagcaggatgtgtcactggagctcggtgaagagcgggtcggacagaaactg
ttcgtgtttatcgaagggaaagtggcggatgaggatgcgtatgtgggcaggacatatgcc
gacgcaccggggatcgacggatacatattcgtcaatacacagacgccgctgatgacgggg
gattttgtacaggtgaccgtgaccgggtcgcttgaatatgatttgattggagaaatagcc
gatgaatacaccgaataa
DBGET
integrated database retrieval system
