Rhodococcus jostii: RHA1_ro04199
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Entry
RHA1_ro04199 CDS
T00382
Name
(GenBank) DNA polymerase III subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rha
Rhodococcus jostii
Pathway
rha03030
DNA replication
rha03430
Mismatch repair
rha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHA1_ro04199
03430 Mismatch repair
RHA1_ro04199
03440 Homologous recombination
RHA1_ro04199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rha03032
]
RHA1_ro04199
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro04199
Enzymes [BR:
rha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHA1_ro04199
DNA replication proteins [BR:
rha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHA1_ro04199
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHA1_ro04199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
DnaX_C
AAA_16
AAA_19
AAA_30
Rad17
AAA_5
Mg_chelatase
AAA_14
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ABG95990
UniProt:
Q0S8Z6
LinkDB
All DBs
Position
4405990..4408251
Genome browser
AA seq
753 aa
AA seq
DB search
MALYRKYRPASFSEVVGQEHVTEPLSTALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSTPCGQCPSCVALGPGGSGNLDVTELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTTAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLAPA
TMRGLLEKICQQESVPVADPVYPLVIRAGGGSPRDSLSILDQLLAGAGDEGVTYPRALAL
LGVTDVALIDDAVDALATGDGAALFGTVDRVMDAGHDPRRFAVDLLERLRDLILMQAVPD
AAERGLVDAPGDVLEHMRAQVQRIGPATLTRYAEVMHAGLGEMRGATAPRLLLEVMCARM
LLPAASDAESAVLQRLERVERGLPPAGSAPAVDAAERPAAAPARAPQQPAEPEPEPKFQR
PSMRQAAAATVPPPPEPEPEPMPRPVPEPAPTPVPEPEPQPEPTPVPEPTPAPDPEPAPT
PAPAPAPVPEPEQTPVPEPTPVPEPTPAPEPTPEPEPEPPIAPEVEAEPAASAGPDAAAL
REAWNSLREKVSQRNKILPAMLSAATVHDVQGYRLILAHPVPNLGARIASPHNAQVITEV
LAEMFGGTWEVEYQAGAPTAPPPPVAKAAAAPTKPAGAPRFSRPSQERTAQRPPQQQSDT
QRSDSAGPAAGQARPSSEPDDDIPPPEAPDYPDDPGPIDYEASATTPPVSTPEDEEEMFA
EAAEPVDPTTRRDPEDVAFELLKDMLGAKKLEG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgtaccggaagtaccgacccgcatccttctctgaggtggtggggcaggagcac
gtcaccgaaccactgagcaccgctctagacgccggacggatcaaccacgcgtatctgttc
tccggtccccgcggctgtggcaagacgtcgtctgcccgcatcctggcccgatccctgaac
tgcgtcgagggtcccacctcgacgccgtgcggccagtgcccctcgtgcgtggcgctcggc
cccggcggttcgggcaacctcgacgtcaccgaactcgacgcggccagccacggtggtgtc
gacgacacccgtgagctgcgcgaccgcgcgttctacgcgcccgccgagtcccggtaccgg
gtgttcatcgtggacgaggcccacatggtcaccacggccggtttcaacgcgctcctcaag
atcgtcgaggagccgccggagcacctcatcttcatcttcgccaccaccgaacccgagaag
gtgctgccgaccatccgttcgcgcacccatcactacccgttccggttgctcgcaccggcg
acgatgcgcgggttgctggagaagatctgccagcaggagagtgtgccggtcgcggacccg
gtgtatccgctggtcatccgtgcgggtggcggttcgccgcgtgactcgctgagcatcctc
gatcagctgctcgccggcgcgggcgacgagggtgtcacctatccgcgcgctctcgcgctg
ctcggcgtcaccgacgtcgcgctgatcgacgacgccgtggatgcgctcgccaccggcgac
ggtgcagcgctgttcggaacggtcgaccgcgtgatggacgccggacacgatccgcgccgg
ttcgccgtcgacctgctcgagcgtctgcgcgacctcatcctgatgcaggcggtgcccgac
gccgccgaacgtggcctggtcgacgcgcccggcgacgtgctcgagcacatgcgcgcccag
gtccagcggatcggtcccgccacgctcacccgctacgccgaggtgatgcacgcaggtctc
ggtgagatgcgcggcgccaccgccccccgcctcctgctcgaagtgatgtgcgcccggatg
ctgctgcccgcggcgtccgatgcggagtccgccgtgctgcaacgactcgaacgggtcgaa
cgcggacttccgcccgccgggtcggcgccggccgtcgacgccgcagagcggcccgcggcg
gctcctgcgcgtgcgccgcaacaacccgccgagccggagccggaaccgaagttccagcga
ccgtcgatgcgccaggccgcggcggccaccgtgcccccgccgcccgagccggaacccgaa
ccgatgccgcggccggttccggagcccgcgccgacgcccgttcccgaaccggagccgcag
cccgaaccgacgccggttcccgaaccgacgcccgcgcccgaccccgagcccgcgccgact
cccgcaccggcgcccgctcctgtgccggaacccgagcagacccctgtgccggaaccgact
cctgtgcccgagccgacccctgcaccggagccgactcccgaacccgagccggagccgccg
atcgcccccgaggtggaggcggagcccgccgcatccgccggcccggatgctgccgcgctg
cgggaagcctggaattcgctgcgcgaaaaggtgagtcagcggaacaagatcctgcctgcc
atgttgtcggccgcgacggtgcacgacgttcagggctaccgcctgatcctggcgcacccc
gttcccaacctgggcgctcgcatcgcgtccccgcacaacgcccaggtgatcaccgaggtg
ctcgccgagatgttcggcggcacctgggaagtggagtaccaggccggcgctccgacggcg
ccgccgccgccggtcgcgaaggccgccgcagcgccgacgaaaccggcaggcgcaccgcgg
ttctcccggcccagccaggagcggaccgcacagcgcccgccgcagcagcagtccgacacg
cagcgctccgattcggcgggtccggctgcgggacaggcacgtccgtcgtccgaaccggac
gacgacatcccgccgccggaggcacccgactatccggatgatcccgggccgatcgactac
gaggcttcggcgaccacgccacccgtctccacacccgaggacgaggaagagatgttcgcg
gaggcggcggaacccgtcgatcccacgacgcgccgcgacccggaagacgtggcgttcgaa
ctgctcaaggacatgctcggggccaagaagctcgagggctga
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