Rhodanobacter denitrificans: R2APBS1_2704
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Entry
R2APBS1_2704 CDS
T02495
Name
(GenBank) Rhs family protein
Organism
rhd
Rhodanobacter denitrificans
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
ChitinaseA_N
fn3
SusE
Motif
Other DBs
NCBI-ProteinID:
AGG89783
UniProt:
M4NJB3
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All DBs
Position
complement(2860237..2866059)
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AA seq
1940 aa
AA seq
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MRTGIVFGLFLAVVSSAAHAQYNGVDPYEEFGKRLNAAQQVTPLTSTLFGDNVSLYNGAT
EFGVTDVDIPGNNVLPVQLRRRLVIEDRRADPGSSLAGFGDWDIDIPYIVATVITQNGWQ
LNQSSGYSYNRCSDNVDWPNMEVFIPITSSVGDAPYGQVWGGNRMHVPGGGDQELLANTQ
AASPAYALRQTYPWVTSGNYRVSCMATAQNGLAGEAFVATSPSGVRYTFDWAVTRQAPLL
AWQYSTTAKPFAVGRTNVYLLVTRAQDRFGNWVNYSYTGDQLTQITSSDGRTITLTWSGS
TITSVTSALGTWSYTYVTGSNGKPQLSAVTRPDGSQWTYAVTSGTLVTTKNDWPDDAHPP
AGHCQIAPLQNSGSFVYTIGAPSGAIGTFDFEYVRHIRNYVPLSCPGDGNPYHNYPVVYD
FLDNFSLVSKQISGPGLATQTWTYQDGGPSGPYYYTASVPWSYNNNAQPYISPDVCSTCS
LSKTVTVTSPGDVTKYIFGVQYARNEGQLLGTEVDDLSGHVSRSSANNYISDADALSQPF
PNIAGQSLLPNFENPMGNRIRPVKQTVLTQDGDTYTALTEAFDAFAQPTKTKRFNSISGQ
AAIEEQTAYLNDLPHWVLGLPQQVDNLTTGETESKNVYDLTNVTLSQRWRFGQLVKSYTF
DALGQLTSFTDGNNHTTSLSNYKRGEPQLINFPDLTSESLVVDDAGRITSVTDQGGHTAS
YTYDAMGRIARISYPGGDEQAWYPTTFAYSFVAAAERGIAANHWRRTVITGNASEVTYFD
AMLRPLLSDTSIVGSAGSDITTAKGYDWRGQNIFASYPVSGAPDLSILTTGTHQTYDVLG
RLTKSQQDSELGVLTTATAYLSGARQQVTDPKGNITTTSYQVFDQPTYDAVTLVQAPGGI
TQAIVRDLYGNPTSITQSGLYNGTETDSVTKTLTYDSYHRLCRTTEPESGSTALAYDAAN
NLAWSASGLTIIGTGCGADQVAAAARTTFTYDGMNRLLTIAPPSGTQSTQTTYDALGQVT
KAVSGTSIWNGTYNFRGMLTSESLQLTGQNPWTISYIHDAYGHLAAVNYPAGTGTSEAVA
YAPDALGRATKVGSYAGSIGYFPNGALAEFTYGNGTGYVAEQNTRQLLSNFTFGTTSTLN
LSEDFTYDVNGNITQVTDLAGGPRSKTFGYDALNRLTSATANGLWGTESYTYDPINNLRT
RLSAGQTFSYNYDATNKLTDIFNGASPVDSFVYDNRGNVINKNGVSLVFDQKNQLTQIPG
YDSYAYDASGRRVSKTPASDGAAIYYFYDHAGQLMYQWEPGTGKATNFIYLGSKLIARNV
NYNTRVIGTIDGVVIDGSGNATVNGWACSTGLNQSIGVEVFAGGPSGGGGTRVATATANI
ASESAVSTACQASGTAYRFAVPLTTAVRTQYTGAPIYMYGDSPVGNGNLVLNQSGTFFIP
APPVSGAPTLTAPASNTTGGYAVGWSAVTGATSYTLQEQINGGSWTTIQSSAATSWTASG
KSNGTYGYRVQGCNTSGCGAWSSTANTTVLLPPPTPASISVPATSNGSVTISWAASSTAT
SYTLQQSLNGGSWVSVYNGTATSTSHTLTVSGSYTFQVNACNTSGCSAYRVSGTVAATLP
PVSAPSLSVPASSSMGSYTVSWGAVSTAITYTLEEQVNGGSWTTIQATSATSRAISGKGN
GTYGYHVQACNAGGCGPWSAIGNTVVLQPPATAPALSVPASSNTGSYTVSWGAVSTATTY
TLQEQLNGGSWTTVQSSSATSLAISGKGSGTYGYHVQACNAGGCGPWSATGTIVAAVPIA
INGNAYAVGYLIPSGQKGYSTIGFKIVGGTTWQVYSATPAGNVVKLSGALPTGAATVQYT
WTYVGIPSGDVDAGGTLTNNASSPVAVSGNPAGYYTTGTFGPTSGSRGRTYQVRVDFYNA
AGSNISSSTATMTAETEGSI
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacagggatcgtgttcggtcttttcttggcggtcgtctcttcggctgcccacgct
cagtacaacggagtcgatccctacgaggagtttggcaagcgcctcaacgcggcccagcaa
gtcactcctctcacgtcgacgctgtttggcgataacgtcagtctctataacggcgcgacc
gagttcggcgtgacggacgtagatattcccggcaacaacgtgctgccggtgcaattgcgg
cgcaggctggtgattgaggatcgtcgcgccgatcccggcagctctttggcggggttcggc
gactgggatatcgacataccttacatcgtggcgacggtcatcacgcagaacggctggcag
ttgaatcagagttccggctacagctacaaccgttgtagcgacaatgttgattggcccaat
atggaggtattcatccccatcacgagttcggtgggtgatgcgccttatgggcaagtgtgg
ggcggcaacaggatgcatgtcccgggcggcggggatcaggagctgttggccaatacgcaa
gccgcgtcgcctgcgtacgcgttgaggcaaacttatccttgggtgaccagtggcaactac
cgggtcagttgcatggcgactgcccagaacggccttgctggcgaagccttcgtggcgacc
tcgccatcgggtgttcgctataccttcgactgggcagtcacgcgccaggcaccgctactc
gcctggcaatattcgacaacggccaagccgtttgctgtcgggcgcaccaacgtctatctg
ctggtcacgcgtgcccaggaccgtttcggcaactgggtcaattacagctataccggcgat
cagctgacccagatcacatccagcgacgggcgcacaatcaccctgacatggtcgggcagc
accattacctcggtgaccagtgccttgggcacttggtcatatacctatgtcaccgggtcc
aacggcaaaccgcagctgagtgctgtgacgcggccggacggctcgcaatggacctatgcc
gtcacatcgggcacattggtcacgaccaagaacgattggccggatgatgctcatccgcca
gcgggccactgccagatcgcccctctacagaattctggatctttcgtttacacgatcggt
gcgccatcgggagcgatcggtactttcgatttcgaatacgttcgccatattcgtaactac
gttccgttgtcctgcccgggcgacggcaatccatatcacaactatccggtcgtctacgat
ttcctcgacaatttttcactggtgtccaaacagatcagtggcccagggttggctacacaa
acctggacttatcaggacggtggtcccagcggaccctactactacactgcgtctgtgcca
tggagctacaacaacaacgcacagccctacatttcccccgacgtctgttcaacctgttcg
ttgtccaagactgtcacggttaccagccccggcgatgtcaccaagtacatcttcggtgtg
caatacgctcgcaatgaaggccaactgctcggtaccgaagtcgatgatctttccggccac
gtatccagaagctccgccaacaattacatcagcgatgccgatgcgctgagtcagccgttt
cccaacattgcgggtcaatccttgttgcccaacttcgagaacccgatgggcaatcggata
cggccggtcaagcaaacagtacttactcaggacggtgacacgtacacggcgctaaccgag
gctttcgatgccttcgcgcagccgaccaagaccaaacgcttcaacagcatttcgggccag
gcagcgatcgaagagcagacggcgtatctcaatgacctgccgcactgggtgctcggcctg
ccgcagcaagttgacaatctcaccaccggtgaaacggaaagcaagaatgtctacgacctc
accaacgttaccctttcgcagcgctggcgcttcggccaattggtgaaaagctacaccttc
gacgcactgggccagctgacgagcttcactgatggtaacaatcacaccacaagcctgagc
aactacaagcgtggtgagccccaactcatcaattttccggatctgaccagcgaaagcctg
gtcgtggacgacgctggccggatcactagcgtgaccgatcagggaggccacaccgctagt
tacacctacgacgcgatgggtaggatcgcccgtattagctatcccggcggcgacgagcag
gcgtggtatccaaccaccttcgcgtacagcttcgttgccgctgccgagcggggcattgca
gccaaccactggcggcgcacggtcatcaccggcaatgccagcgaagttacctacttcgac
gccatgctgcggcccctgctcagcgatacctcgatcgtaggcagcgccggttcggacatc
acgacggcgaagggctacgattggcgcggacagaatatctttgcgtcatatccggtcagc
ggtgcgccggatctgtccatcctcaccactggtacgcatcagacctacgacgttctgggg
cggctgacaaagagccaacaggattctgaactgggggtgctcaccaccgcgacagcgtac
ctgtctggcgcccgccagcaagtgacggatcccaagggcaacattaccaccaccagttac
caggttttcgatcaaccgacctacgatgcggtgaccttggtgcaggcacccggcggtatc
acccaagccatcgtccgcgatctttacggcaacccgacctccatcacccagtcgggcctc
tacaacggcaccgagactgacagcgtcaccaagacactgacctacgacagttatcaccgc
ttgtgccgcaccaccgagccggaaagcggcagcaccgcgctggcctacgacgcagccaac
aatctggcgtggagcgcgtcgggtttgaccatcatcggcaccggatgcggggcggaccag
gtcgccgcggccgcacggaccactttcacctacgacgggatgaaccggctgctgacgatc
gcgccccccagcggcacgcagagcacccagaccacctacgacgcgctcggccaagtgacg
aaggcggtgtccggtaccagcatctggaacggcacctacaacttccgcggcatgctcacc
agtgagtcgttgcagctgaccggacagaacccctggacgatcagctacatccacgatgcc
tacggtcatctcgccgccgtgaactacccggcaggcacaggcaccagcgaggcggtagcg
tatgcacccgatgcgctgggtcgggccaccaaggttggcagctatgccggcagcatcggc
tatttccccaacggtgccctggcggagtttacctacggcaacggcaccggctatgtggcc
gaacagaacacccggcagttgctgagcaactttaccttcggcaccaccagcacgctcaat
ctcagtgaggatttcacctacgacgtcaacggcaacatcacccaggtgacggacctggct
ggcggtccgcgcagcaagacgtttggttacgatgccctcaatcgcctgaccagcgccacg
gctaacggcctgtgggggacggagtcctacacctacgacccaatcaacaacctgcgcacc
cggctgagtgcagggcagactttcagctacaactacgatgcgacgaacaagctgaccgac
atcttcaacggtgccagcccggtcgatagtttcgtgtatgacaaccggggcaacgtcatc
aacaagaacggcgtcagcctagtcttcgaccagaagaaccagctcacccagatcccgggc
tacgacagctatgcctatgatgcgtccgggcggcgggtgagcaaaacgccggccagcgac
ggggccgccatctactacttctacgaccacgccggtcagctgatgtaccagtgggagcca
ggcaccggcaaagccaccaacttcatctacttgggcagcaagctgatcgcccgcaatgtg
aactacaacacccgtgtgataggcacgatcgacggggtggtgatcgatggtagtggcaat
gccacggtgaacggctgggcctgttccacgggattgaaccaatcgattggtgtagaagtg
ttcgccggtggcccatcgggcggcggtggcacccgagtcgccaccgctaccgccaatata
gccagtgagtcggccgtgtccacggcatgccaagccagcggcacggcatatcgcttcgcg
gtgccactgaccacggcggtgcgtactcagtacaccggtgcgcctatctatatgtatggc
gactcgcccgtgggcaatggcaaccttgtactgaaccagtccggtacattttttataccc
gcgccgccagtgtcgggagcaccgaccctgaccgcgccagcgagcaacaccaccggtggc
tacgcggtggggtggagcgcggtcaccggcgccaccagctacacccttcaggagcagatc
aacggcggtagctggaccaccatccaaagtagtgcggccaccagttggacggcaagcggc
aagagcaacgggacgtacgggtatcgggttcagggctgcaatacaagtggctgcggggca
tggagcagcacggctaacacgacggtgctgttgcctccgccgacacccgcgagtatcagt
gtgccggcgaccagcaacggcagtgtaacgatcagttgggcagccagcagcacagccact
agctacacattgcagcagagcctcaatggcggcagctgggtcagtgtctacaatggtaca
gctaccagcacgagccacacgctgacggttagtggcagttatacttttcaagtaaatgcc
tgcaacactagcgggtgtagtgcctatagggtcagcgggacagtggcagcgacattgcca
cccgtcagcgcgcccagtttgagtgtcccggccagcagcagcatgggcagctacacggtg
agctggggcgcggtcagcaccgccatcacgtatacactggaagagcaggtcaacggcggc
agctggaccacgatccaggccaccagcgcgaccagccgggcgatcagcggcaagggcaac
ggcacctacggctaccacgtgcaggcctgcaacgccggtggctgcgggccgtggagcgcg
atcggcaacaccgtggtgctgcagccaccggccacggcgcctgccctaagcgtgccggcc
agcagtaatacgggcagctacacggtgagctggggcgcggtcagcaccgccaccacgtat
acgttgcaggagcagctcaacggcggcagctggaccacggtccagagcagtagcgccacc
agcctggcgatcagcggcaagggcagcggcacctacggctaccacgtgcaggcctgcaat
gccggtggctgcgggccgtggagtgcgaccggcacaatcgtcgcggccgtccccatcgcc
atcaatggcaatgcctatgcggtgggctacctcattcccagcggacagaaggggtattca
acgatcggattcaagatcgtcggcggcaccacgtggcaggtgtacagcgccacacccgcc
ggcaacgtggtcaagcttagcggcgcgctacccaccggggcggcgaccgtgcagtacacc
tggacctatgtggggataccgtccggggatgtcgatgccggcggcacgctgacgaacaac
gcgtcctcaccggtggcggtcagtggcaacccggcgggctactacaccaccggtactttc
ggcccgacgtctggctcgcgcgggcgcacgtaccaggtacgcgtggatttctacaacgcc
gccgggagcaacatctccagctcgaccgccaccatgacggcggagacggaggggtcgata
tga
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