Ruminiclostridium herbifermentans: EHE19_012410
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Entry
EHE19_012410 CDS
T07161
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00300
Lysine biosynthesis
rher00550
Peptidoglycan biosynthesis
rher01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EHE19_012410
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EHE19_012410
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
EHE19_012410
Enzymes [BR:
rher01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EHE19_012410
Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
Precursor biosynthesis
Amino acid ligase
EHE19_012410
BRITE hierarchy
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QNU65717
UniProt:
A0A4U7JI36
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Position
complement(3050124..3051590)
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AA seq
488 aa
AA seq
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MLLRELVKDLEIKSVQGSLDINIESIAYDSRKTKQDSLFVCIEGTVVDGHMYISDAILNG
TKAFLVQKHIDVPEGVTVVEIEDTRYGLACVSDAFFSHPSSKINLVGITGTKGKTTTTYM
VKSILQAAEHKIGLIGTVANLIGDEILYATRTTPESFDLQSLFGEMVEKKVDSAVIEVSS
QGLELHRVAKCDFDVGVFTNFSRDHIGPREHATLEDYFNAKAKLFKMCKQAVINIDSEQG
KKMAELASCKVYTYGICEAADIRATDIVKETEYTSFYLTSPWGNTSIRTNLQGNFNIYNA
LAAIGSCCLIPGITLEHVKEGLKNVNVPGRMETVPTDGNYSVLIDYAHTPDSLEKVLSTV
KEFAKGRVVSLFGCGGDRDPGKRPLMGEISGKIADFSIITSDNPRTEEPEKIINDIEAGI
TKTNGKYIKITDRRQAIKFALENAQDGDIIILAGKGHETYQQFKDKTVHFDEREVVDELL
VELGRRKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcttcgcgaattggttaaagatttagaaataaaaagtgtgcagggaagtttggat
ataaatattgagagtattgcttatgactccaggaaaacaaaacaggattcattgtttgta
tgtatcgaaggaactgttgttgacggacatatgtacatatctgatgctattttaaatgga
acaaaggcatttctagttcaaaagcatatagatgttccagaaggtgttacagttgtagag
attgaagataccagatatggcttggcatgtgtttctgatgcatttttttctcatccatcg
agtaagattaatttagtaggaattacaggtacaaaagggaaaactaccacaacatatatg
gttaagtcaattcttcaagcagcagagcataaaataggactaataggaacagttgcaaat
ttaattggagacgagatattatatgctacaagaactacaccagaatccttcgatttacaa
agtctatttggtgaaatggtggagaaaaaagtagatagtgccgttatagaggtgtcctca
cagggcttggaattgcatagagtagcaaaatgtgattttgatgtgggtgtatttactaat
ttttccagagatcacataggccctagggagcatgcaactttagaggattattttaatgca
aaggctaagctatttaaaatgtgtaagcaagcagttataaatattgacagtgagcaaggt
aaaaaaatggcggagttggctagttgcaaggtttatacttacggaatatgtgaggctgca
gatatcagagccacagatattgttaaagaaactgaatatacttccttttatcttacttct
ccgtggggtaacacaagtattcgaacaaacctgcaaggtaattttaatatttataatgca
cttgcagcaattggttcatgttgtctaataccaggaataacattggaacatgtaaaagaa
gggcttaagaatgttaatgtaccaggcagaatggaaacggttcctaccgatggaaactat
tcagttctgatagattatgcccatactccagatagcttagaaaaagtgctttcaactgtt
aaggaatttgcaaagggcagagttgttagtttatttggttgcggcggtgacagagaccca
ggaaaaagacctttgatgggtgaaatttcaggaaaaattgctgatttttcaataataact
tctgataaccctagaacagaagagcctgagaaaattattaatgatattgaggcaggcatt
actaaaacaaacgggaaatatattaaaataacagatagaaggcaagcaataaagtttgca
cttgaaaatgcgcaagatggagatataattattttggcaggtaaggggcatgaaacttat
cagcaatttaaagataaaacagtacactttgatgagagagaagtagtagatgaattgctg
gtggagcttggaaggagaaaaaaatga
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